KEGG   Cucurbita maxima (winter squash): 111479316
Entry
111479316         CDS       T05246                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like
  KO
K11797  PH-interacting protein
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmax04121]
    111479316
Ubiquitin system [BR:cmax04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111479316
SSDB
Motif
Pfam: WD40 NBCH_WD40 Bromodomain Auxin_resp Agenet
Other DBs
NCBI-GeneID: 111479316
NCBI-ProteinID: XP_022979650
UniProt: A0A6J1ITW5
Position
Unknown
AA seq 1718 aa
MTNMALRKFVCGATPSINLKHSSFPAKVHEQAQFEEPETNQTLESDVEIDPREVYFLIMH
FLSSGPCRRTCGLLWDELFENQLLPRRYHAWYSRNGMHSGHENDDGLSFPLSYQHLVERY
PHVDKNHLIKLLKQLMLNKAPPSRGMSGAIAPNAADVPTLLGTGTFSLLSYDKHDGVGKP
SGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKR
LRGHRNAVYCASFDRMGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA
VVASSSNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRAAYQLLSSSDDGTCRLWDAR
SSSQNAPRIYVPRPLDSVIARNGGSSASTLPQSHQIFCCAFNACGTIFVTGSSDTLARVW
SACKGNNDNPDQPNHEIDVLAGHENDVNYVQFSGCAVASRFTTTDIVKEDNVHKFKNSWF
TYDNIVTCSRDGSAIIWVPRSRRSHGKVGRWTRAYHLKVPPPPMPPQPARGGPRQRILPT
PRGVNMIIWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAM
SAGYDGKTIVWDIWEGTPIRIYEISHFKLVDGKFSSDGTSIILSDDVGQLYILSTGQGES
QQDAKYDQFFLGDYRPLIQDPFGNVVDQETQLSTYRRNLQDLLSDSGMIPYPEPYQTAYQ
QRRLGAMGLEWRPSSLKLSTGPDFNLDPDYQLLPLADLDMLIEPLPEIVDAMDWGPENEV
QSDDTDSEYNVTEDYSTGGEQRSLNSNCSTDSECSSDDTGIDDGLRRSKRKKQKAYMEVM
TSSGRRVKRRNMDEYEGDTVRNSRNRKSKSGHRASKKKSASKSLRPQRAAARNARNWISS
FKGKCTDGEDEYESGGDCSESESTLEDSDIESDEYERSLQNRNKHSKGKEVFLDEAELIT
KPLDVPESRVDSGNRKKLILKFSLKNPNKVDPPSNTTLTCTNMADVASSSSRSPKEVIET
SQNLMRSERQFGNTDGHSDLTEVYTNGNIRWGGSKVRSSKRIRLDAYALSSPFRNGDHNE
NENTVHEYLERENHFGAPSPHSKIQNYHADETHAVSLTNLKDDDDNASGHSPEMVNGGEL
KCVSNSKSCDDHDDSNNLNFMFSSDATTSIQYGTPAPEQTENIAPMCTKIRLKSSSLDPE
HSLKHKIESLDENSKNDEYYTVSGSPRRLNGLQDTVMNEAFSDLRNDCPQDMDTAMDEKP
ISTLCSSSELQAVETNKMYTAVYRRSKSNKGKSNIESNGCDSGEHALGNISLSAEANNHK
SMLRKTRSLRFKDSYDPNNVCDDLKSDEDQELEQKSRRSGNSPANRSHIPSEEWGSSSRM
TVGSRSTRNRRGSLTQDLNPVDRRKSVQYARKGSWLMMPAHEGGSRYIPQLGDEVAYLRQ
GHQEYIDHCCANYCHTKDMGPWTATRGTIRAVEFCKVVELVYSTSAGSGDSCCKMLLKFI
DPASSVYFQSFKLTLPELTSFPDFLVERTRFEAAMQRNWTFRDKCKVWWKNDVGVDGSWW
DGRIVSVQPKSSEFPESPWERYTIKYRSDPAEPHLHSPWELYDIVTQWEQPRIDDENKAK
LSTAFDQLMSAPMQGRYGIQDLMLLSRKTQFKNRFPVPLCLEIIQERLQNDYYRNLEALK
HDFMVMLSNYESFVAKNEDMSKKIRRLSDWFNRNISTL
NT seq 5157 nt   +upstreamnt  +downstreamnt
atgactaatatggctcttcggaagtttgtttgtggtgctacaccttctattaacttgaaa
cattcaagttttcccgctaaggtgcatgagcaagctcaatttgaagaacctgagactaac
cagacgttggagtctgatgtagaaattgaccctagagaagtttattttcttattatgcac
tttctttcatctgggccatgtcgtagaacttgtgggctgctctgggatgagctttttgaa
aatcagcttttaccccgacgatatcatgcttggtattcaagaaatgggatgcatagtggg
catgaaaatgacgatggcttgtcatttccattaagttaccaacacttagtggagaggtat
ccacatgtcgataagaatcacctgataaagcttttgaagcaattgatgcttaacaaggcc
cctccatctaggggtatgagtggtgcaattgctccaaatgcagcggacgtacctacatta
ttgggaacgggcacattttcacttctgagctatgataaacatgatggagttggcaaacca
agtggtcccccggcacacatgcgttggcctcatatgaaagctgattctgttcgtggatta
agtttgagagaaattggaggtggtttctcccgacatcaacgtgctccttctgtgcgtgca
gcatgttatgcaattgctaagccatcaacaatggtgcagaaaatgcaaaacataaagagg
ctacgagggcatcgtaatgctgtttattgtgcaagttttgatcgcatgggaaggtatgtt
ataactggttcagatgatcgccttgtaaagatttggtcaatggaaactgcatattgcttg
gcaagctgccgaggacatgagggtgatatcactgaccttgctgtaagttctaacaatgct
gtggtggcgtcatcttcaaatgattttgttattcgtgtttggcgtttgcctgatgggctg
ccaatttcagtcttacgaggacatactggtgctgttactgcaattgcctttagtcccaga
gctgcctatcagcttctttcatcgtcagatgatggaacgtgtaggttatgggatgctcgg
agctcttctcagaatgctcctcggatttatgttccaaggcctttggactctgtgattgca
agaaatggtggctcttctgcgagtactcttcctcagagtcatcaaatattttgctgtgca
tttaatgcttgtggcactatttttgttactggtagttctgacactctagcaagggtttgg
agtgcctgtaaaggaaacaatgataacccagaccaaccaaaccacgagattgatgtgtta
gctggccatgagaatgatgtcaattatgtgcaattcagtggatgtgccgtagcatcaaga
tttacaactactgacattgtgaaggaagacaatgttcacaagttcaaaaactcctggttc
acttatgacaatatagttacttgttctcgtgatggcagtgcaattatttgggttccaagg
tcacggaggtcacatgggaaggtaggtcgctggacccgtgcataccatttaaaagtgcct
cctccacccatgcccccacaacctgcccgaggtggccctcgtcagaggattcttcctacc
cctcgtggtgtaaatatgataatttggagcctagataatcgttttgtcttagcagctata
atggattgtagaatttgtgtttggaatgcctctgatgggagcttagtgcactctttgacg
ggtcatactgaatctacgtatgtactcgatgttcatccttttaatccaaggattgctatg
agtgctggatacgatggaaaaacaatagtttgggatatttgggaaggcacgccaattcgg
atatatgaaatttctcatttcaaactggttgatgggaagttttcttcagacgggacatca
attatactttcagatgatgttgggcagctatatatattaagcaccggtcagggagaatcc
caacaggatgccaagtatgatcagttctttcttggtgactatcgcccacttattcaggat
cctttcggcaatgtagttgaccaagaaacccaactcagtacttacagacggaatttgcaa
gatctcctttctgactcaggcatgataccttatccggaaccttatcagactgcatatcag
caaagacgtttaggtgctatgggtcttgagtggcgtccctcttcgctaaaactttctact
gggcctgacttcaatctcgacccagattaccaattgctgcctttggcagacttggacatg
ttgattgaaccattgcctgagattgtggatgcaatggattggggaccagaaaatgaagta
caaagcgatgatactgattcggaatacaacgtcactgaggattactctactggtggggag
caaagaagcctaaattcgaactgctcaacggattcagaatgtagctctgatgacacaggg
attgacgatggtcttcgaaggtcaaaaaggaaaaaacagaaagcatacatggaggtcatg
acttcttcaggaaggcgtgttaaaagaagaaatatggatgagtatgaaggtgatactgtt
aggaattccagaaatcggaagtcaaaatctggtcatagagcatccaaaaagaaatcagca
tctaagtcattaagacctcaaagagcggctgcacgtaatgcccgcaactggatatcatcg
tttaagggaaaatgtacagatggagaagatgaatatgagtcgggaggtgattgctcagaa
agtgaatctacattagaagattcagacattgagagtgatgaatatgaaaggtcattgcaa
aacagaaataaacattcaaaagggaaagaagtattccttgatgaagctgagttgattaca
aaacctctcgacgttcctgaatctcgtgtagattctggaaacagaaagaagttgatcctt
aaattctcccttaagaatccaaataaggttgatcctccttcaaacacaacacttacttgc
accaacatggctgatgtggctagctcatcatcaagatcaccaaaggaagttattgaaacc
agtcagaatcttatgagatccgagagacaatttggaaatactgatggacattctgatctg
actgaggtctacacaaatgggaacataagatggggagggtccaaggttcgttcgtccaag
cgcataagattagatgcatatgcattatctagtccatttcgcaatggtgatcataatgaa
aatgagaatactgttcatgaatatttagaacgagaaaatcattttggtgcaccatccccc
cattcaaagatacagaattatcatgcagatgaaacacatgctgtatccctgacgaatttg
aaagatgacgatgataatgcttctgggcactctcctgagatggtcaatggtggtgagctc
aaatgtgttagcaacagcaaatcatgtgatgatcatgatgattcaaataatttgaatttc
atgttttcttcagatgcaaccacatcaatacaatatgggactcctgctcctgagcaaact
gaaaatattgcaccaatgtgtacaaagataaggttgaagagtagttctttggatcctgaa
cattctttgaagcacaaaatagaatccttagacgaaaattcaaagaatgatgaatactat
acagtatctggaagcccacggcgtctgaatgggctgcaggatactgtcatgaatgaagct
ttttctgatcttagaaatgattgcccacaagatatggacactgcgatggatgaaaaacca
atatcaaccttatgcagctcatcagagttgcaagcagttgagacaaacaaaatgtacact
gctgtttatagaagatccaagtcgaacaaaggaaagagcaatatagaaagcaacggttgt
gactcaggggaacatgcattgggcaacattagtctgtctgctgaagcaaacaatcacaaa
agtatgcttcgtaagacacgatctttaaggttcaaggactcatatgatccaaataatgtg
tgtgatgatctaaaatcagacgaagatcaagaacttgaacaaaaatcaagacgttctgga
aattctcctgcaaacagatcccatataccaagtgaagagtggggatcaagctcaaggatg
actgttggatccagatccactcgaaacagaaggggtagtcttactcaagacctaaatcct
gtagatagaagaaagtcggttcaatatgccagaaaaggatcatggttaatgatgcctgca
catgagggtggctccagatatattcctcaacttggagatgaagttgcatatctgagacag
ggtcatcaggaatacatagatcactgctgtgcaaattactgtcacacaaaagacatggga
ccttggaccgcaacccgaggaaccatacgagctgttgagttctgtaaggttgtggagctt
gtttattcaacttctgcaggttccggagatagttgctgtaaaatgctactcaagttcata
gatcctgcttcctctgtatacttccaatctttcaagttaactctgcccgagttgactagt
ttccctgacttcttagtcgaaagaactcggtttgaagcagcaatgcagaggaattggaca
ttcagggacaagtgcaaagtgtggtggaaaaatgatgttggagtagatggtagttggtgg
gatggtcggattgtctctgtgcagccaaaatcttcagagtttccagaaagtccttgggaa
aggtacacaattaagtataggagtgatcctgcagaaccacatttacatagtccttgggag
ctttatgatattgttactcagtgggaacagcctcgaatagatgacgaaaataaagcaaag
ttgtcgactgccttcgaccaattaatgtcggcccctatgcagggccgttatgggattcaa
gatctgatgcttctctcacggaagacacaattcaagaacaggtttcctgtaccattgtgc
cttgagataatccaggaaagattacagaacgattactaccgaaacttggaagctttgaag
catgacttcatggtaatgctatcgaattacgagtcattcgtggctaagaacgaagacatg
tcgaagaaaattagacgcttgtcagactggtttaatcgcaacatatcgactttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system