KEGG   Cyanidioschyzon merolae: CYME_CMK058C
Entry
CYME_CMK058C      CDS       T00175                                 
Name
(RefSeq) geranylgeranyl diphosphate synthase, chloroplast precursor
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme00900  Terpenoid backbone biosynthesis
cme01100  Metabolic pathways
cme01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:cme00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    CYME_CMK058C
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cme01006]
    CYME_CMK058C
Enzymes [BR:cme01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     CYME_CMK058C
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     CYME_CMK058C
    2.5.1.29  geranylgeranyl diphosphate synthase
     CYME_CMK058C
Prenyltransferases [BR:cme01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   CYME_CMK058C
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 16994416
NCBI-ProteinID: XP_005536487
UniProt: M1US29
Position
11:167218..168384
AA seq 388 aa
MTPPFFCHTFCSAGAFVPVNVSHFRAQLRKQETCEELASRDAWGRSRSRGNCLHGKNLPS
RHRQALLLLGTATAGSSAEVRHGSPKSRTTEAVEFLLAKRASIDAALNDAVQATSVMNAR
LAEAMRYSLLAGGKRVRPALVLAACRMFGGVDEQAMPTAVAVEMVHTMSLIHDDLPAMDN
DDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQIAEKTPATLVPPSRTLEVIRRLGNCVG
LHGLAAGQALDLEAEGKPADEISLRMLETIHLYKTAALLRFSITAGAILAGASVDDIDCM
ESFANKIGLAFQVADDVLDVTATTETLGKTAGKDVAAEKATFPRILGLEESRKYAEDLVK
EAKGELAKYGDRASLLLGFADFIIQRAS
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgactccgccgttcttctgccacaccttctgttcagcgggggcgtttgtcccggtgaac
gtaagccactttcgtgctcagttgagaaagcaggagacttgtgaggaacttgcttcgagg
gacgcttggggtcgctccagaagcagggggaactgtttgcatggtaagaacttgccgagc
aggcaccggcaagcgttgcttttacttggaacggcgactgcaggctccagtgcagaggtt
cgacacggctcgccaaagtcgcgaaccaccgaggcagttgagttccttctcgctaagagg
gcctccatagacgccgctcttaatgacgccgtgcaagcaacctccgttatgaatgcccgc
ctagcggaggcgatgcgttactctttgctcgccggagggaaacgtgtacggccggcactc
gtcttagctgcgtgcagaatgtttggaggtgtcgatgaacaggcgatgcccacggccgtc
gcagtggagatggttcatacaatgagcctcattcatgacgatctcccggcgatggataat
gatgatttccggcgcggacgtccaacaaaccacaaggtttacggtgaggaagtagccatc
cttgctggggacgcgttacttagcgaggcgttctcgcagatcgcagagaaaactccagca
acccttgtaccaccgagtcgcacgcttgaggtcattagacgcctcggaaactgtgtcggc
ttacatggcttggcagccggacaagcgcttgatcttgaggcggagggaaaaccagcagat
gagatcagcctacgcatgctggaaacgatccatctgtacaaaaccgccgcattgttgcgc
ttttccatcaccgcgggagcgattctagcaggtgcctcagtagatgacattgattgtatg
gaaagctttgcgaacaaaattggtcttgcttttcaagttgcggatgatgtcctggatgtg
accgcgacgaccgagacacttggcaagactgccggaaaagatgttgcggccgagaaggcg
acgtttccgcgcatacttggtcttgaagaaagccgaaagtatgctgaagacttggtcaag
gaggcgaagggagaactcgccaagtacggcgaccgggcatcattgctcttgggttttgcg
gatttcatcattcagcgcgcgagctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (40)   

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