KEGG   Cyanidioschyzon merolae: CYME_CML137C
Entry
CYME_CML137C      CDS       T00175                                 
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K14807  ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cme03009]
    CYME_CML137C
Enzymes [BR:cme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CYME_CML137C
Ribosome biogenesis [BR:cme03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    CYME_CML137C
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_16
Other DBs
NCBI-GeneID: 16994553
NCBI-ProteinID: XP_005536780
UniProt: M1V8M0
Position
12:319276..321054
AA seq 592 aa
MCSGATSEENDGHIMEQDSSAAVGGNESATSAQLHGIPVVYLATDDQARFATADLRIQSV
PGVPQELADTLERDYAITHLFPFQKEVLAYIRSTALTHSGDVLLGAPTGSGKTLIYALAV
LLDLYSSASLFCVRALVVLPTRELARQVEGIFRTLTASAKLSARVAVLSLLRERVPRSDL
LNRQAVCITTPGRLVEALDRHELLLADLRWLVIDEADRLFRQSYQNWLERLLQRIDCARR
VLDPPLRRLRKLLFSATQTRDATHLAALRLHHPVYLLCHASTEGARQPSKLRRGLMDQVP
AGLTLCSLRFLSEEDKLRFLLRLIVCGPDILATLRDPSDQSSRPDHNRMLIFVKSVETTH
RLCRFVQLASNWLWLRHYPSPVSTRDRGPRLLAEEISKQVSESARAATLERFQRGTTQWL
ICSDVMARGMDIAEASHVVNFDVPAHPTTYLHRVGRVARAGRPGTALTFLLRNQVGYFQS
EIIARVRNDTQKDLGIIRAEHIVPDLRREPFGFGVEHILRGTALILELEQQALVAPHQPL
SLVISAYVREQVVDEPVNEVTEMRAGKSVKRMKRALSIIALQNWCDKSETFA
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtgtagcggtgccacctcagaagagaatgacggtcacatcatggaacaggatagctca
gctgcggttggtggtaacgagtcagcgacgtccgctcagttgcacggcatacctgtggtt
tacctcgcaacggatgatcaggctcgcttcgcaaccgcggacttacgcattcaaagtgtt
cctggagtgccccaagaacttgctgacaccttggagcgcgattacgccatcacgcacctc
tttccatttcagaaagaggtgcttgcgtatatccgaagcaccgcgctgacgcactcgggg
gacgtgctgcttggcgctcccactggcagtggcaagacacttatctacgcactcgcagtt
cttctggacttgtatagctctgcatcgctgttctgcgtgcgggcactggtggtcttacct
acgcgggaactcgcccgccaagttgaaggcatctttaggactttgacggcttctgcaaaa
ctgtccgctcgcgtggccgttttatcacttctgagggagcgtgtccctcggagcgatctc
ttgaacaggcaagcagtatgcattacaacaccagggcggcttgtggaagcgttggatcgg
catgagctccttcttgccgacttgcgatggctggtcatcgacgaggctgatcggctattt
cgtcagtcgtaccaaaactggttagagcggctactccaacgaatagactgtgcacggcgg
gtgctagatccaccgttaaggcgtctcagaaagctgcttttctccgccacgcaaacgagg
gatgcaacccatttggctgcgctgcgccttcatcacccggtttacctcctgtgtcacgcg
tcgaccgaaggcgctcgccaaccatcgaagttgcgcagggggctcatggaccaagtacct
gcaggactgaccctgtgctcgctgcggtttctctccgaggaggataagctgcgcttcctc
cttcgtctcattgtgtgtggcccggacatcctcgccacgctgagggatccgtctgaccaa
tcgagtcgcccagatcataaccgtatgttgatttttgtgaaatctgttgaaacgacccat
cgactttgtcgattcgtacagctcgcctcgaactggttatggctgaggcattacccgagt
ccagtatctactcgggaccggggtccgcggctgctcgcagaagagataagcaaacaggtc
tccgaatcagcacgtgcggcgacgttggagcgcttccaacgcggcacgacgcagtggttg
atctgttccgatgtcatggctcggggcatggacattgcggaggcatcgcatgtcgtgaat
ttcgatgtaccagcacatccaacaacttatcttcatcgagttggacgcgtcgcacgggca
ggtcgacccggaactgccttaacgtttcttttgcgaaaccaagtggggtattttcagtct
gaaatcattgcacgggtgcgcaacgatacccagaaggacctcggaatcattcgtgcagag
catattgtccctgatttgagacgcgaaccttttggtttcggtgtcgagcatatccttcgt
ggtaccgcattgatacttgagcttgagcaacaggccctggtggcaccacatcaaccattg
agtcttgtgattagtgcgtatgttcgcgagcaggttgttgatgagcctgtgaatgaggtg
acggagatgcgcgcgggaaaatccgtgaagcgaatgaagcgcgcgctgagcatcatcgca
cttcagaattggtgcgacaagtccgaaaccttcgcatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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