KEGG   Cyanidioschyzon merolae: CYME_CMT427C
Entry
CYME_CMT427C      CDS       T00175                                 
Name
(RefSeq) RuvB-like DNA/RNA helicase reptin
  KO
K11338  RuvB-like protein 2 [EC:5.6.2.3]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CYME_CMT427C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cme03036]
    CYME_CMT427C
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cme03037]
    CYME_CMT427C
Enzymes [BR:cme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CYME_CMT427C
Chromosome and associated proteins [BR:cme03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     CYME_CMT427C
  Chromatin remodeling factors
   SRCAP complex
    CYME_CMT427C
   INO80 complex
    CYME_CMT427C
   INO80 complex (yeast)
    CYME_CMT427C
   SWR1 complex
    CYME_CMT427C
   ASTRA complex
    CYME_CMT427C
Cilium and associated proteins [BR:cme03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   CYME_CMT427C
SSDB
Motif
Pfam: TIP49 TIP49_C AAA AAA_22 AAA_16 RuvB_N AAA_5 Mg_chelatase DnaB_C AAA_19 Sigma54_activat AAA_25 AAA_28 Zeta_toxin TsaE ATPase IstB_IS21 AAA_18 nSTAND3 AAA_7 NACHT Parvo_NS1 AAA_29 RNA_helicase bpMoxR ABC_tran DUF815 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 16998233
NCBI-ProteinID: XP_005539403
UniProt: M1VIH4
Position
20:complement(1053245..1054681)
AA seq 478 aa
MITESVQELVKIERIGAHSHIRGLGVDPETLEPLETRQTAPDNEKYERYGLVGQYRARRA
AAVVCRMVQEGKLAGRGVLLAGQPGTGKTALATAMAQQLGPETPFTKLTGSEVYSLEISK
TECLIQACRRSIGVRIREETDVIEGEVVELEVDRDAQQNQVGRIVLKTTDMETVYELGRR
MTEELLRRRVRPGDVISIDKGSGRVTKLGRSFARSREFDTAGEDTRFVACPEGEVQKRRQ
VEHIVSLHDIDVINSRQQGFLALFTGDTGEIKPEVREQIDARVAQWCEEGKAEIVPGVLF
IDEVHMLDIECFAFLSGVLESQFAPLLVCASNRGVTRIRGTEFCAPHGVPVDLLDRMLII
PMYPYDEPECHEILRIRSEEEDIVLSRPALALLAKIAVETSLRYAMYLMTTTAVLCGQRR
GSQVEIDDVKRAYLLFMDTRRSTQYLLAHADDYMMSEVDGQAEEPAPSTAETPKAASP
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgataaccgagtcggtccaagagctggtgaagatcgagcggatcggcgcgcactcgcac
atccgagggctcggcgtagatcccgagacgctcgagccgcttgaaacccgtcaaacggca
cccgataatgaaaagtatgagcgttacgggcttgtaggccaatatcgagctcgcagagca
gcagctgtcgtctgcagaatggttcaggaaggtaaactcgccgggcgcggggtgttgctc
gccggtcaaccagggactggcaaaacagcgctagcgactgccatggcgcagcagttgggg
cccgaaacgccgtttaccaaactgacgggctcagaggtgtactcgttagaaatctcgaag
accgagtgtctcattcaagcgtgtcgacgaagtattggcgtccgcatacgagaagagacg
gacgtcatcgaaggagaggttgtggagctcgaagttgaccgtgacgcacaacagaaccaa
gtcggccgtatcgtgctcaaaacaaccgacatggagaccgtctatgagctcggacgtcgc
atgactgaggaactcctacgacgacgggtacgaccaggggacgtcatctctatcgataag
ggtagcggccgtgtcaccaaactgggacgctcgtttgctcgcagtcgggagtttgacacc
gccggggaagacacgcgtttcgtcgcctgccctgaaggagaggtccagaaacgtcgacaa
gttgaacacattgtctcgcttcacgatatcgatgtcattaattctcgtcagcaagggttc
ctggcgctgttcactggcgatacgggtgaaattaaacccgaagtccgtgagcagatcgat
gcacgtgtagcgcagtggtgcgaggaaggcaaggcggaaatcgttcccggtgtactgttt
atcgacgaggtgcatatgctggatatcgagtgcttcgcctttttgagtggcgtactagag
tcgcagtttgcgccgctcctggtatgtgcgagcaaccgcggagtcacgcgcattcgtgga
acggaattctgtgcaccacacggggtgcccgttgatctcctggatagaatgctcatcatt
cccatgtatccgtatgatgagccagagtgtcatgagattctgcgcatccggagcgaggag
gaggatattgtgctttcgcggccggctctggcgctacttgccaagatagcagtggagacg
agtttacgatacgccatgtatctcatgacgacgacagcagtgctttgtggccagcggcgg
ggttcccaagttgaaatcgatgacgtcaagcgggcgtacttgcttttcatggatacgcgt
cgcagcacgcagtatctgctcgcacatgcagatgattacatgatgagcgaagttgacggt
caggccgaggaacccgcaccgagtaccgcagaaaccccgaaagcggcatcgccatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (47)   

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