KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_1197
Entry
CMM_1197          CDS       T00529                                 
Symbol
uvrD2
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03420  Nucleotide excision repair
cmi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CMM_1197 (uvrD2)
   03430 Mismatch repair
    CMM_1197 (uvrD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_1197 (uvrD2)
Enzymes [BR:cmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CMM_1197 (uvrD2)
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CMM_1197 (uvrD2)
   MMR (mismatch excision repair)
    Other MMR factors
     CMM_1197 (uvrD2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: CAN01241
UniProt: A5CQ88
Position
1362928..1366203
AA seq 1091 aa
MSGDGAAGVGTTGAGGGGVISARRIAEALDLPSPTEQQRRVIESPLEPGLVVAGAGSGKT
ETMASRVVWLLANGHVGVEEILGLTFTRKAAGELGVRIRARIEQLQQAGLAAVPADAFAT
PTVQTYNAFANGIFRDSATLIGREAESVVLTEASAWQLARRLVVESTDPRLLELGRGVDP
ITQAVISLSRAMSENVADPAEVVRLAGSFTGLAELPFGSARIRKAPAAEAVAAVGALPPL
VDLAVRFQEEKTRRGLVEYSDQVAFALAICERVPQVVAEHRKRFRVVLLDEYQDTSVVQT
RLLSTLFGGTPVMAVGDPHQSIYGWRGASAANLARFGADFAPTGAASADVPVYALSTSWR
NPASVLGAANRIVEPLTAASRIPVARLEPRPDAGDGRLDVAYEETVADEAASVAAWFADR
LRQTGSDGRPRSAAMLCRSLKTIEPFTTALADRGVPFRVLGLGGLLDQPAVVDLVCVLRV
LHDPTAGSELVRLLAGARWRIGTKDVHALSRVASWLMSRDHAQKPLAEEVRDGLRASVVP
DEVGSVVDALDFVVDARDGHTALAGFSADGLARLRAAGRQLQVLRSRVGLDLVDLVTVVQ
QELLLDIEVAANETDPLGRASLEAFTEQVARYLQGDSAGTLGPFLAWLAEAERRDNLAPR
TEEPEPGTVQILTIHGSKGLEWDVVAVPRMVEGELPGTLREKRGWVAFGALPFEFRGDSA
ELPSLAWRGAETQKEFAEAMEAFGEELEERNAAEQRRLAYVAITRTRSDLLLSGSFWSTQ
QKPRGPGAFLREIQQVGLIAPDALPEAPELEENPLEPGSARVAWPLPPLGPREARVRAAS
DAVADADPGAETVWTRDIDLLLAERDARARDAELVDLPTRIPASRFKDFVSDPAGVAARL
RRPMPERPYRQTRLGTLFHGWVEARYGPAGTADVIDASGVELDADPTEPPVEQEDLDRLR
ATFEASEWASRKPEEVEVEIHMELAGQVVICKIDAVFLIDGRYRVVDWKTGRTPKDAADL
ELKQLQLALYRLAFAKWRGIDPDLIDAEFYFVAEGRSLKPERLYSEEDLVGLWSGARTPD
ASRAPSGETVG
NT seq 3276 nt   +upstreamnt  +downstreamnt
gtgagcggcgacggcgctgccggcgtcgggaccaccggcgcgggcggcggcggcgtgatc
agcgcccgccgcatcgccgaggcgctcgacctgccgagccccaccgagcagcagcggcgc
gtcatcgagtcgccgctcgagcccggcctcgtggtcgcgggcgccggcagcggcaagacc
gagacgatggcgagccgcgtggtgtggctgctcgccaacgggcacgtcggggtcgaggag
atcctcggcctcaccttcacgcgcaaggccgcgggcgagctcggggtgcggatccgcgcg
cgcatcgagcagctgcagcaggccgggctcgcggccgtgcccgcggacgcgttcgccacg
cccaccgtgcagacctacaacgccttcgcgaacggcatcttccgcgacagcgccaccctc
atcggccgcgaggcggagtcggtcgtgctcacggaggcgtccgcctggcagctcgcgcgc
cgcctcgtcgtcgagagcaccgacccgcgtctgctggagctcggacgcggggtcgatccc
atcacgcaggccgtcatctccctgagccgggccatgagcgagaacgtcgcggacccggcc
gaggtcgtgcggctcgccgggtcgttcacgggcctcgcggagctgccgttcggatccgcc
cggatcaggaaggccccggcggccgaggcggtcgccgcggtcggcgcgctgccgccgctc
gtcgacctcgccgtgcggttccaggaggagaagacccggcgcgggctcgtggagtacagc
gaccaggtcgcgttcgcgctcgccatctgcgagcgggtgccgcaggtcgtcgcggagcac
aggaagcggttccgcgtcgtgctcctcgacgagtaccaggacacctcggtcgtgcagacc
cggctcctctccacgctcttcggcggcacgccggtcatggccgtgggggatccgcaccag
tccatctacggctggcgcggcgcgagcgcggcgaatctcgcgcgcttcggcgccgacttc
gcgccgaccggcgccgcctccgccgacgtgcccgtctacgcgctctccaccagctggcgg
aacccggcctccgtgctcggcgcggcgaaccgcatcgtcgagccgctgaccgcggcctcc
cggatccccgtcgcgcgcctcgagccccggcccgacgcgggcgacggccggctcgacgtc
gcgtacgaggagacggtcgccgacgaggccgcgagcgtcgccgcgtggttcgccgaccgg
ctgcggcagaccggatccgacggccgcccccgctcggccgccatgctgtgccgctcgctc
aagaccatcgagccgttcaccacggcgctcgccgaccggggcgtgccgttccgtgtgctc
ggcctcggcggcctgctcgaccagcccgccgtcgtcgacctcgtgtgcgtcctccgcgtg
ctgcacgaccccaccgcgggcagcgagctcgtgcggctcctcgcgggcgcgcgctggcgc
atcgggaccaaggacgtgcacgcgctcagccgcgtcgcctcctggctcatgtcccgggat
cacgcgcagaagccgctcgccgaggaggtgcgcgacggcctccgggcctccgtggtgccg
gacgaggtcgggtccgtcgtcgacgcgctcgacttcgtcgtcgacgcccgcgacggccac
accgcgctcgccgggttcagcgccgacggcctcgcgcgcctccgtgccgcgggccgccag
ctgcaggtgctgcgctcccgcgtcgggctcgacctggtggacctcgtcacggtcgtccag
caggagctgctcctcgacatcgaggtcgccgccaacgagacggatccgctcggccgcgcg
agcctcgaggcgttcaccgagcaggtggcccgctacctccagggcgactccgccggcacg
ctcggcccgttcctcgcgtggctcgccgaggccgagcggcgtgacaacctcgcgccgcgc
accgaggagccggagcccggcacggtgcagatcctcacgatccacggctcgaagggcctc
gagtgggacgtcgtggccgtgccgcgcatggtcgagggcgagctgcccggcacgctccgg
gagaagcgcggctgggtcgcgttcggcgccctgcccttcgaattccgcggcgactccgcc
gagctgccgtcgctggcgtggcgcggcgcggagacgcagaaggagttcgccgaggcgatg
gaggcgttcggcgaggagctcgaggagcgcaacgccgccgagcagcggcggctcgcgtac
gtcgcgatcacgcgcacgcggtccgacctgctgctgagcggctcgttctggtcgacgcag
cagaagccgcggggtcccggggcgttcctgcgcgagatccagcaggtgggcctcatcgcg
cctgacgcgctgcccgaggcgcccgagctggaggagaacccgctcgagcccggatccgcg
cgcgtcgcctggccgctgccgccgctcggcccccgcgaggcccgcgtgcgcgccgcctcc
gatgccgtcgccgacgcggacccgggcgcggagaccgtgtggacccgcgacatcgacctg
ctcctcgccgagcgcgacgcccgcgcacgtgacgccgagctcgtcgacctgcccacgcgc
atcccggcgtcgcgcttcaaggacttcgtgagcgaccccgcgggcgtcgccgcgcgcctg
cgccgccccatgcccgagcgcccgtatcggcagacccggctcggcacgctcttccacggc
tgggtcgaggcccgctacgggcccgcgggcacggccgacgtcatcgacgcgtccggcgtc
gagctggatgcggatccgaccgagccgcccgtggagcaggaggacctcgaccggctgcgc
gcgaccttcgaggcgagcgagtgggcgagcaggaagcccgaggaggtcgaggtcgagatc
cacatggagctcgccgggcaggtcgtcatctgcaagatcgacgcggtgttcctcatcgac
ggccgctaccgcgtcgtcgactggaagaccggccgcaccccgaaggacgccgccgacctc
gagctcaagcagctccagctcgccctctaccgcctcgccttcgcgaagtggcggggcatc
gaccccgacctcatcgacgccgagttctacttcgtcgcggagggccggtccctgaagccg
gagcggctctactccgaggaggacctggtggggctctggtcgggtgcgcgcacgcccgac
gcgtcgcgtgcgccgtcgggggagacggtgggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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