KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2584
Entry
CMM_2584          CDS       T00529                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CMM_2584 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmi03021]
    CMM_2584 (rpoA)
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_2584 (rpoA)
Enzymes [BR:cmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CMM_2584 (rpoA)
Transcription machinery [BR:cmi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CMM_2584 (rpoA)
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CMM_2584 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: CAN02667
UniProt: A5CU80
Position
complement(2919873..2920868)
AA seq 331 aa
MLIAQRPTLTEESISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNEKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLTELFGLARELNSAAEGIEIGPAPVD
AVLSSELSMPIEDLDLSVRSYNCLKREGINNVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDAVPGFDGAHYYSYDEDETTTN
NT seq 996 nt   +upstreamnt  +downstreamnt
gtgctcattgcgcagcgccccaccctcaccgaggagtccatctcggagttccgctcgcgg
ttcgtcatcgagccgctcgagcccggcttcggctacacgctcggcaactcgctccgccgc
acgctcctctcgtccatccccggcgcggccgtcaccagcatccggatcgacggcgtgctg
cacgagttcagcaccgtccccggcgtgaaggaggacgtgaccgagatcatcctcaacatc
aagggcctcgtcgtctccagcgagcacgacgagccgatcaccgcgtacctgcgcaagcag
ggtgcgggccaggtcacggccgccgacatctcggctccggccggcgtcgagatccacaac
cccgagctcgtcatcgccacgctcaacgagaaggcgaagttcgagctggagctgacgatc
gagcgcggccgcggctacgtctcggcgacccagaaccgcagcgagttcagcgaggcgggc
cagatcccggtcgactcgatctactcgcccgtgctcaaggtcacctaccgcgtcgaggcc
acccgtgccggcgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagaccaagtcg
gccatcacgccgcgcgacgccatcgcgtccgccggccgcacgctcaccgagctgttcggc
ctggcgcgcgagctcaactcggccgcagagggcatcgagatcggccccgcgccggtcgac
gccgtcctcagctccgagctgtcgatgcccatcgaggacctcgacctctcggtgcggtcg
tacaactgcctcaagcgcgagggcatcaacaacgtcagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcaaggacaag
ctggtcgagctcggtctgtcgctgaaggacgccgtccccggcttcgacggcgcgcactac
tacagctacgacgaggacgagaccaccaccaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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