KEGG   Callorhinchus milii (elephant shark): 103176341
Entry
103176341         CDS       T03088                                 
Symbol
mrc1a
Name
(RefSeq) macrophage mannose receptor 1
  KO
K06560  mannose receptor, C type
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103176341 (mrc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmk04131]
    103176341 (mrc1a)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cmk04054]
    103176341 (mrc1a)
   04090 CD molecules [BR:cmk04090]
    103176341 (mrc1a)
   04091 Lectins [BR:cmk04091]
    103176341 (mrc1a)
Membrane trafficking [BR:cmk04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    103176341 (mrc1a)
Pattern recognition receptors [BR:cmk04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   103176341 (mrc1a)
CD molecules [BR:cmk04090]
 Proteins
  103176341 (mrc1a)
Lectins [BR:cmk04091]
 C-Type lectins
  Group 6: Mannose receptor family
   103176341 (mrc1a)
SSDB
Motif
Pfam: Lectin_C fn2 Ricin_B_lectin UL45
Other DBs
NCBI-GeneID: 103176341
NCBI-ProteinID: XP_007887990
Position
Unknown
AA seq 1451 aa
MSGILIVAFLHFIQMFAYGDPNVFLIHNINHNRCVIAKTAKSVVTGTCDPNAESQQFKWV
SSKRLMSMKFKLCLGVPEKKDWVPVTLYPCSDKSDLQKWVCKNDTLFSIEDADLYFNYGN
RNEQNIMLYKGSGHWSRWRVHGNANDICSVIYEDKFTIHGNSNAQPCVFPFKFHNKTYAD
CTMDGRKDGLLWCATSSDYKDGKWGFCPENTVNCNNLWNKDPLTGICYLINFNSALTWHE
ARKSCQQQSSDLLSVVELHDQTYLTGFMSGKSLSMWIGLNKLNTDGRWQWSNNNPFRYLN
WAPGQPNFEAASKCVAMDSARGSKWESKLCSKKLAYICQKNNAKTSSPAIPVTEVPISCP
TGWLPFAGYCYILQREQKTWQQSLTACRKEEGDLASIHNIEEYSFLISQLGYLPTDELWI
GMNDIKNQMLFEWSDGSPVTYTIWEHDEPSHFSNKYEDCVLMRTKDGYWADQVCEKEHGY
ICKLKPLAKVPGNEQEILAEEGCPMGWKKYGLHCYLTGQSEKTFNDANKACQSQDSFLVN
VEDRYEQAFLTSLIGFRTEKYFWVGVQSDLKTRGSFKSTNGEAIMFTHWNAEMPGRSVGC
VAMATGSAAGLWDVYNCANKAKYICKRWQIGITPTPFISTTPAPKCSGNWETYQNSRYCY
KIFEKSQIEKKSWFDARDYCQAIGGNLASISDVSEDEFLQNKIESRRSHQSFWIGLNKPD
PNGGFVWSDGSPVIYEKWNQGEPNNYRGLENCVEARLSGILQWNDNHCETYQSWICKIRK
GNPVKPDPTIAASEKIETTEDGWIVFHDSQYYINHYSMSWDEARTYCKKQQGDLVIISSA
SERNFLWKQIAKNANNQYFIGLVVDLDKSFQWIDGSPMDYVAWAHHEPNFANNDENCVTM
YTNLGFWNDMNCGNQFPFICERSNSSTRPTYVSTLPPGPGGCPIGWVPFGKKCFIFYGED
KVHKLPWHGARDICILKGGNLATIESDYEQAFATMSLNGFPTNVWIGLNDINSENKFTWT
NGKPMIYTNWAKGFPSGSSFTFRSQNADCVWLSINKKNEEGCWVDNDCSLKRGFVCQKDK
DRALTLGPTTVPEPTYIEYDNSTYKIIQVKLKWQDARKVCEAEQAQLVSIRNGFANAFLM
LQARKLDTKLWIGLNGNETAREFRWIDGWKLRFSKWAVGEPKNNYDCIIINQNGFWETAE
CDDEYWAICKRSSELPPTDAPQLPGKCPESTNTKMWIPFRGHCYLFETMFSKNWASASLE
CIRQGSSLISITDPVENTFIEHTLEIMSDRTSQLWIGMYLNIKGEWLWLDNSVVDFVNWN
RGEPSNHKNEVCVEIYSNTGYWNNIPCTMFKGYICKRPKIIELTEAPSQTEVLEQKQLPK
HSVAGIVVVLTIVCIIGFLLTVYFIRKQKQKAPQADTNFDNTLYFNTESAVGPGDMKSLV
TNIEQNEQGSM
NT seq 4356 nt   +upstreamnt  +downstreamnt
atgtctggaattctgattgttgctttccttcatttcatccaaatgttcgcttatggagat
cccaatgtctttttaatacacaatataaatcataatcggtgtgtgatagctaaaactgca
aaatcagtggtgacaggtacttgtgatccgaatgcagagtcacagcagtttaagtgggtc
tccagtaagagacttatgagcatgaaattcaaactctgccttggagttcctgaaaagaag
gactgggtgccagtcaccctctacccctgcagtgataaaagtgatcttcaaaaatgggta
tgcaagaatgatacactgttttccatcgaagatgctgatctctatttcaactatgggaat
cgaaacgagcaaaatataatgctctacaaaggatcaggacattggagcaggtggagagtg
catggcaatgcaaatgatatctgttcagtaatctatgaagacaaatttaccatacatggc
aattcgaatgcgcagccatgtgtgttcccttttaagttccacaataaaacgtatgctgac
tgcacgatggatggaagaaaggatggtttgctttggtgtgccacaagctcagattacaaa
gatggcaaatggggattctgtcctgaaaatactgtaaattgcaataatttgtggaataaa
gaccccttaacaggcatctgttacctgattaacttcaattcagctttgacgtggcatgaa
gcaagaaagagctgtcaacagcaaagctcagatttactgagtgtggtggagctccatgat
cagacatacctaacaggatttatgagcggtaagtctctatcgatgtggattggactgaat
aagctgaatactgatggtcgctggcagtggagtaataacaatcctttcagatacttgaac
tgggctcctgggcaaccgaattttgaggccgcttccaagtgtgtagccatggattcagcg
agaggatcaaagtgggaaagcaaattgtgttccaagaaactggcatatatttgtcaaaag
aataatgcaaaaactagttctcctgctatcccggtgactgaagtgccaatttcttgccca
acgggatggctgccgtttgcaggttattgctatattcttcagagagaacaaaagacgtgg
cagcagtctttaacagcgtgccgaaaggaggaaggggacctagcaagtatccataacatt
gaggagtatagctttctgattagccagctcggatacctacctactgatgagctgtggatt
ggaatgaatgatattaaaaatcagatgctgttcgaatggtcagatggatctccagtaaca
tatactatatgggagcatgatgaaccaagtcattttagtaacaaatatgaggactgtgtg
cttatgaggacaaaggatggatactgggcagatcaggtgtgcgaaaaagagcatggatat
atctgcaaactcaagcctcttgcaaaggttccaggaaatgagcaggagatccttgcagag
gaagggtgtccaatgggctggaagaaatatgggcttcactgctatttgaccgggcagtct
gagaagactttcaatgacgcaaacaaagcatgccagagtcaagattctttccttgttaat
gttgaagacaggtacgagcaagcttttctgacaagtttaattggtttccgaactgagaaa
tatttctgggtcggcgtgcaatctgacctaaagacaaggggcagcttcaagtcaacgaat
ggagaggcgatcatgttcactcactggaatgctgagatgccagggaggagcgttggttgt
gttgccatggcaactggcagtgctgctggattatgggatgtttacaattgtgcgaacaag
gcaaagtatatctgcaaacgatggcaaattggaataacacccactccatttatatccacc
acccccgccccaaaatgttcaggaaactgggaaacgtaccaaaactccagatactgctac
aagatatttgaaaaatctcaaattgaaaagaagtcttggtttgatgctcgggattactgc
caagccattggagggaatcttgccagcatcagtgatgtctcggaggatgagtttctccag
aataaaatagagtcaagaaggagccatcagtcattttggattgggctgaataaacctgac
ccgaatggtggatttgtatggagtgatggcagcccagtaatttatgagaaatggaaccaa
ggagagcccaacaattaccgtggacttgagaactgtgttgaggcacgtctcagtggaatc
ttgcaatggaacgacaaccattgtgaaacctatcagagctggatttgcaaaattagaaaa
ggaaatcctgtgaagccagatcctacaattgcagcttcagagaagattgaaacaacagaa
gatggctggattgtgtttcatgattctcagtattacattaaccactattcaatgtcgtgg
gatgaagccaggacatactgcaagaagcaacaaggagatcttgtgatcatcagtagtgct
tccgaaagaaattttttgtggaaacagattgccaagaatgccaacaatcaatatttcatt
ggcttggttgtggatcttgataaaagttttcagtggattgatggctctccaatggattat
gtagcctgggcgcaccacgaacctaattttgcaaataatgatgaaaactgtgtaaccatg
tacacaaatcttggattctggaatgatatgaattgtggtaatcaattcccttttatatgt
gaaagaagtaacagttcaacaagaccaacatatgtttccacattaccgcctggaccaggg
ggatgtcctattggctgggttccttttggaaagaagtgtttcatattttacggtgaagat
aaagtacacaaattgccttggcatggtgcgagagatatttgtatacttaaaggagggaat
ctggcaacaattgaaagtgattatgaacaagcatttgctaccatgtccctgaatggcttt
cctacaaatgtgtggattggattaaatgatattaacagtgagaacaaatttacttggacc
aatggaaaaccgatgatctacaccaattgggccaagggttttccgtcaggaagcagtttc
acatttcgcagccagaatgctgactgtgtctggctgagtataaacaaaaaaaatgaagaa
ggatgctgggtagataacgactgtagtttaaaacggggctttgtatgccagaaggacaaa
gatcgtgcgttgactttggggccaacaactgtgccagagccaacatatattgagtatgac
aatagtacctacaaaataatccaagtgaagcttaaatggcaagatgcccggaaggtttgt
gaggcagagcaagcccagcttgttagtatcaggaatggtttcgcaaatgccttcctaatg
ttgcaagccagaaaactcgacacaaaattgtggatcggattaaatggtaatgagacggca
agagagttcaggtggattgatgggtggaaactgcgcttttcaaagtgggctgttggagaa
cccaaaaataattacgattgtatcatcatcaatcagaacggattctgggaaactgcagag
tgtgatgatgaatattgggctatttgcaaaagatcttcagagctgccaccaactgatgcc
cctcaactcccaggaaagtgccctgaatcaacgaatactaaaatgtggattccattccgt
ggccactgctatttgttcgaaacaatgttttcaaaaaactgggcatctgccagcctcgaa
tgcatccgtcaaggttcttcattaatcagtattacggatcctgtggaaaatacctttata
gaacatacactagaaatcatgtctgacaggacgagccagctctggataggaatgtatttg
aatattaaaggcgaatggttgtggttggacaacagtgtggtggattttgtgaactggaac
cgtggagaaccttcaaaccataaaaatgaggtctgtgttgaaatatactcaaacacaggt
tattggaacaatatcccttgcactatgttcaaaggctacatttgcaaaaggccaaaaata
attgaactaacagaagcaccttcacagacagaagttctagagcagaagcagctgccgaag
cacagtgttgcagggattgtggtggtgctgactattgtctgcatcatcggttttctactc
actgtctactttatccggaaacagaagcagaaggctccacaagcggacacaaactttgac
aatactctttacttcaacacggagagcgctgttggacccggtgatatgaaatctctcgtg
acaaatatagaacaaaatgagcaaggttctatgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (213)   
   KEGG ORTHOLOGY (1)   
   RefGene (209)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (234)   

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