KEGG   Callorhinchus milii (elephant shark): 103178162
Entry
103178162         CDS       T03088                                 
Symbol
lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmk04121]
    103178162 (lnx1)
Enzymes [BR:cmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103178162 (lnx1)
Ubiquitin system [BR:cmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    103178162 (lnx1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-rbx1 TRAF3_RING
Other DBs
NCBI-GeneID: 103178162
NCBI-ProteinID: XP_007890935
UniProt: A0A4W3IIM0
Position
Unknown
AA seq 739 aa
MSQSDPAEEMPSMVQPLCITCGQIHSPEENHAYNFQDEIDDDLICHICLQPLVQPLDTPC
GHTYCTVCLTNFLQGKDFCPMDRKPLCLKVCKKSSILVHKLLDKVLVICPFKEDCSDVLQ
RCDLEIHLHRRCKGAANYGLLGERKKQCQEGCSVGDGDSVPRIPADDSDVTMSVLSSQLS
ASAAVAFMTDDAGLVNPAFDAEDNRSESSSSAHSKSSNKIYRHSEHKPMRSRSFKKLNRA
FSYLRRTSSGNLVGSNSGEIVQTDTPPEEACPRLHHLIPDGEVTTIKINRSDAQECLGIS
IVGGCETSVENIVIQDIYRDGAISKDGRLLPGDMILEVNGTDIKNVPHNYALAVLRQPCE
NLLLTVLREQRYKCRSSSEANCARDDSFHITLYKSSHEHLGIKLVRKADESGVFIFNLLQ
GGLAAQDGQLQLNDRVLAINGHDLRHGSPETAAQIIQASEDRVHFIVSRKTREQSPDILQ
ETNWSSSSNSSSSPTSPDERNKHNKNFHHAFTCHEKIVSVSKEPQESLGMTVSGGLSSKS
WDLPIYVTNVHPEGCLGKDGRIKNGDILLNINGIELTGLSQIEAVSMIKHSATSSPVILK
ALELRVADKENVGTQMPLDANQNNMPDDDWSPAWTMWLGLPRYLYWCKDIVLRRNTSGSL
GFSIVGGYEENHGNQPFFIKSIVDGTPAYNDGRLRCGDMILAVNRRNTSGISHPCLVKML
KEVRGKVILTVVSWPGSRL
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgagccagagcgatcctgcagaggagatgccatctatggtacagcctctctgtattacc
tgtggacagatacattcccctgaggaaaaccacgcctacaacttccaggatgaaatcgat
gatgatttgatatgtcacatctgcctgcagcccttagtgcagccactagatacaccatgt
ggtcacacctattgtaccgtgtgccttaccaacttcctgcagggcaaagacttctgccct
atggatcgtaagcccctgtgtctgaaggtgtgcaaaaagtcaagtattctggtgcataaa
ctgctggacaaggtgttagttatctgcccattcaaagaagattgctcggatgtcttgcag
cgctgtgacctagaaattcatctacatcgtagatgtaaaggagcagccaactatggactt
ttaggggaacggaaaaaacagtgtcaggaaggctgttcagtaggtgatggagattcagtt
cccaggattcctgcagacgacagtgatgtgaccatgtcggtgctttcttcacaactgtca
gcatctgcagctgtggccttcatgacagatgacgctggtctggtaaacccggcctttgat
gcagaagacaaccgatcagaaagcagttccagtgctcacagcaaaagtagtaacaagata
taccggcattcagaacacaagccaatgaggagcaggtccttcaaaaaattgaaccgagct
ttcagttaccttcgaagaaccagtagcggaaatctggttggtagcaactctggggagatt
gtgcagactgacacacctcctgaagaagcatgccccagattacatcacctaattccagat
ggtgaggttacaaccatcaagatcaatcgttctgatgcacaggagtgtctcggcatcagc
attgtgggaggatgtgaaacatctgtggagaatattgttatacaagacatttatcgagat
ggtgccatttcaaaggatggaagattgttgccaggggacatgatcctggaggtaaatggt
actgacataaagaatgtgcctcataactatgcgttggcagtgctgagacagccgtgcgag
aacctcctgttgactgtactgagagaacaacgctacaagtgtagaagcagcagtgaagct
aactgcgccagagatgacagtttccacatcaccctgtacaagagctctcatgagcatctt
ggaataaaactggtccgcaaggctgacgagtcgggagtttttatctttaatttgcttcaa
ggtggcctggctgcccaagatggccaactgcaactgaatgacagggtactagccatcaat
gggcatgatctccgccatgggtctcctgaaactgcagcacagatcatacaggcaagcgaa
gaccgggtgcattttattgtgtcgcggaagaccagagagcagtcccctgatatcctgcag
gagactaactggagcagcagcagcaacagcagcagcagcccaacaagccccgatgaaagg
aacaaacataacaagaatttccatcatgccttcacgtgccacgagaagatcgtcagtgtt
agtaaagagccccaagagtcgttgggaatgacagtgtcaggcggcctgtcaagcaagagc
tgggatctgccgatctacgttacaaatgtacaccctgaaggctgcctggggaaagatgga
agaataaagaatggtgacattttgctgaacatcaatggcattgaactgactggcttgtca
cagattgaagcagtatccatgatcaaacacagtgccacctcctcacctgtcatactcaaa
gctttggagctgagggtggcagataaggagaatgtggggacccagatgcctcttgatgcc
aatcagaacaatatgcctgatgatgactggtctccagcctggacaatgtggcttggactg
cctcgatacctgtattggtgtaaagacattgtactgagaagaaacacgtctggtagcctg
ggattcagcattgttggaggatatgaagaaaaccatgggaaccagccattttttataaaa
tccattgttgatggaactccagcttataatgatggaagattaagatgtggagatatgatc
ctggcagtcaataggaggaatacctcaggaataagtcacccctgtttggtgaaaatgctc
aaggaagtgaggggaaaagtcattctcactgtggtgtcctggcctggcagtcgtctctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (47)   

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