KEGG   Callorhinchus milii (elephant shark): 103181800
Entry
103181800         CDS       T03088                                 
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103181800 (dcp1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103181800 (dcp1b)
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103181800 (dcp1b)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103181800 (dcp1b)
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 103181800
NCBI-ProteinID: XP_042191357
Position
Unknown
AA seq 653 aa
MAAARGGGGGWGSVWRRGGWGSVWRRGAGAGLGVSLAARGGGRGLGVSLAARGLGISLAA
LQRRDPYICNIVDVASQVALYTFSHKANEWEKTDVEGTLFVYTRSASPRHGFTIMNRLSV
ENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKAECQRIAELMKNLTHLEQWKAQQ
GGGSPHYGESKAVDILQMLSKAEHEYNKVKHSSEPKQITSSSLIHNSSVLIKPIPIKPTE
LGTDAHYQEAQRSDKSTELGTKHLTLAALFGTQVKPISTNVPAQEPKNKVCSRPGVVRSL
SYDEPSRLPKQETSQLEERQLCPAIQKLMGRGTDLQPVSELPENCLCENQIDQPMEDSLT
GLYQVQPSVGNVSTQNPLNESSSFFPNNTHKLLQKLQCTQAPLLTPGPSVIQSELLLSRS
QKDSQIQSFPQTHPTYLSSSLQFQPNLHNIQSVDQAKMTVASNTCSSPAQVSGIISPHEL
LQKLQIVQQEQQLQAGNKMTMAAKFSAQPSVVSQTNSSIKPLESWTEKTACSEKRNPFFQ
VISPQRIPATVASSLLSPMVFSKSVMGKSKTLEAGPLPFAQLDTTQAPKSLLESRLHQPA
QMAELTSHTSNVLTKVQLQETLLYLLKNDPNFLNIIYEAYLTGQANTAAKKKT
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggcggcggcgcggggcgggggcgggggctgggggtcagtctggcggcgcgggggctgg
gggtcagtctggcggcgcggggcgggggcggggctgggggtcagtctggcggcgcggggc
ggggggcgggggctgggggtcagtctggcggcgcgggggttggggatcagtttggcggcg
ctgcagaggcgcgatccctacatctgcaacatcgtggacgtggcgagtcaggtcgcgctt
tacactttcagtcacaaagccaacgagtgggagaagaccgatgtcgagggcaccctattt
gtttacacaaggtctgcttctccgagacatgggtttaccatcatgaacagactgagcgta
gaaaatagaactgagccaatcactaaggatctggactttcagttgcaagatcctttccta
ctctacagaaatgcacgattgtctatctatgggatctggttctatgataaggcagaatgt
cagaggattgcagagcttatgaaaaatttaactcacttggagcaatggaaagctcagcag
ggtggtggatcaccacactatggtgagagcaaagctgtagatatcttacaaatgctatct
aaagctgaacatgaatataacaaggtcaaacattcctcagaaccaaagcagataactagc
tccagtctgattcataacagctcagtcctgatcaaaccaatcccaattaaaccaactgag
cttgggacagatgcccattatcaagaggcacagcgatcagataagagtacagaattagga
acaaagcacttgacattggcagccttgtttggtacacaagtgaaaccaatttcgactaat
gtcccagcacaggaaccaaagaacaaagtttgtagtcgaccaggtgtggtacgttctttg
tcctatgatgagcccagcagattgccaaagcaggagacttcccaacttgaagaaagacag
ctttgtcctgctattcagaaactaatgggccgtggaactgatcttcagccagtgtctgag
ttaccagaaaattgcctgtgtgaaaatcaaattgatcaacctatggaagactctttgaca
ggactataccaagtacaaccctctgtaggcaatgtatctacacaaaatcctttgaatgaa
tccagttctttctttcctaacaatacacacaaattgcttcagaagctacaatgtacacag
gcaccacttcttaccccaggcccttctgtgatacagtcagaacttctcttaagtaggtct
cagaaggattctcagatacagtcttttcctcagacccatcccacctatcttagctccagc
ctacagtttcaacctaatctacacaatattcaatctgtagaccaggccaagatgactgtg
gcctcaaacacctgcagtagcccagcacaggtctctggtattatatctccacatgaatta
cttcagaagctccaaatagttcaacaggaacagcagcttcaggctgggaacaaaatgact
atggcagctaagttttcagctcagccttcagttgtcagtcagaccaattcctcaatcaaa
ccattggaatcctggacagagaaaactgcctgctcagaaaaacggaacccatttttccag
gtcatatccccacaacgcattccagctacagtggcatcatctcttctgtctcccatggtg
ttctccaagtctgtaatgggaaagtccaagaccctagaagcaggtcctctaccatttgca
cagttggacaccactcaagctccaaagagcctgctagagagtcgtctgcatcaacctgca
cagatggcagaactaactagtcatacatcaaatgtacttaccaaggtccagctacaagaa
acccttttgtaccttttgaagaatgaccctaactttttgaatatcatctatgaagcctat
ctcacaggtcaggcaaacactgcagcaaaaaagaaaacctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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