KEGG   Callorhinchus milii (elephant shark): 103186543
Entry
103186543         CDS       T03088                                 
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    103186543 (vti1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmk04131]
    103186543 (vti1a)
Membrane trafficking [BR:cmk04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    103186543 (vti1a)
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Sec20 Mer2 Sec8_N Laminin_II DUF5344 DUF1664
Other DBs
NCBI-GeneID: 103186543
NCBI-ProteinID: XP_042192605
Position
Unknown
AA seq 226 aa
MSSEFESYEQDFGTLTADITHKTGRIPKLSGDEKKHMVGNVEKQMEEARELLEQMDLEVR
EIPVQSRGMFSTRMKSYKQELEKLDKEFKRSRIAYSDEVNLRNELLGDDGNTSENQLIKL
REERAFLLDNTERLERSSRRLEAGYQITVETEQIGQEILENLHHDKEKIQRSRDRLRETD
TNLGKSSRILSGMLRRIIQNRILIFILGGIILLTIVLAIYFAVRGH
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtcctcggagttcgagagctacgagcaggacttcggcaccttgacggcagatatcact
cataagaccgggaggatcccgaaactgtccggagatgagaagaagcatatggttggaaat
gtggaaaagcagatggaagaagcacgggaactgcttgagcaaatggaccttgaagtacgg
gagataccagtccaaagtcgtggcatgttcagcactagaatgaagagttacaagcaagaa
ctggaaaagcttgataaggaatttaaaaggtcacggatcgcctacagtgatgaggtaaac
cttcgaaatgagctcctgggggatgatgggaatacctccgagaaccagttgataaaattg
cgtgaagagagagccttcctgctggataatacagaacgcttggaaaggtcatcacggaga
ctagaggctggataccaaataactgttgaaactgaacaaattggtcaggagattctggag
aacctgcatcatgataaagaaaagattcaaaggtctcgggatcggctgcgtgaaaccgac
acaaaccttggcaagagctccaggatcctatctggaatgttgcgaaggatcatccagaac
cgcatcttgatatttatcctgggcggcatcattctcctcaccattgtgctggccatttat
tttgctgtcagaggacactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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