KEGG   Callorhinchus milii (elephant shark): 103186778
Entry
103186778         CDS       T03088                                 
Symbol
gtf2a1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X2
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103186778 (gtf2a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmk03021]
    103186778 (gtf2a1)
Transcription machinery [BR:cmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     103186778 (gtf2a1)
SSDB
Motif
Pfam: TFIIA DDHD BUD22 TAP42 CCD97-like_C Spt20_SEP RPN2_C DUF702 Pox_Ag35 Neuregulin
Other DBs
NCBI-GeneID: 103186778
NCBI-ProteinID: XP_007904196
Position
Unknown
AA seq 362 aa
MELKTLWENKLMQSKAVDGFHSEEQQILMQAQQQQQQQQQQQQQQQQQQQQQQHHQHHHQ
TQQQPQTQQVLTIPTNSGPQVIMQDGKIIQHMNPTGMSTAASAATLALPAGVSAPYQITS
NGQLLTNTGQLLQVVRAANGAHYFLQPHQQVVLAQPQVIQQMQSSVQAPVIQQMLTPLAP
GSISQQAGVIIQPQQIIVAGNKVASNAQVMQTTTTVAAATPSTQVAQTNSSTPVQQQQQQ
PQQQQQQQQQQPPLVMQVDGAGDTSSEEDEDDEEDEYDDEEEEKDKEEVGEGGQVEEESL
NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDFVFSKAIGDA
EW
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaattaaaaacgttatgggagaacaagctgatgcagtcgaaggctgtagatggcttc
cactcagaggagcaacagattttaatgcaggcgcagcaacaacagcagcagcagcagcaa
cagcagcagcaacagcagcaacaacagcagcagcaacagcatcaccaacaccatcaccag
actcaacagcaaccacagacacagcaagtgctcaccatccccacaaattcaggtccgcag
gttattatgcaagatggaaaaataatacaacacatgaatccaacgggcatgagtacagcc
gcttctgcagcaactttggcattaccggccggtgtttcggctccgtaccagattacctct
aatggacaattactcaccaatacaggacagttgctccaagttgtaagagccgctaatgga
gcccactacttcctccagccgcatcagcaggtggtcctggcacagccgcaggtcattcag
cagatgcagtccagtgtgcaggcgcccgtcatacagcagatgctcactccgctggctcct
ggaagtatctctcagcaggctggagtcatcatccaaccccagcagatcattgtggcagga
aacaaagttgcttcgaatgcacaggttatgcaaaccacaacaactgtagcagcagccacc
ccttcaacacaggtggcccagacaaacagctcaacccctgtccagcaacaacaacaacaa
ccgcagcaacagcagcaacagcagcaacagcagccgcctctggtgatgcaggtggatggt
gctggggacacatcctcggaggaagacgaggatgacgaagaagatgagtacgatgacgag
gaggaggaaaaagacaaggaggaagttggggaaggcgggcaagttgaagaggagtcattg
aacagtgaggatgatgtgagcgatgaagaaggtcaagagctgtttgacacggaaaatgtt
gttgtttgtcagtacgacaagatccacagaagtaagaataagtggaaatttcacctcaag
gatggaatcatgaacctgaacgggagagattttgtgttttccaaagccattggcgatgcg
gagtggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (45)   

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