KEGG   Chlamydia muridarum Nigg 2 MCR: BB17_01240
Entry
BB17_01240        CDS       T03206                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cmn  Chlamydia muridarum Nigg 2 MCR
Pathway
cmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB17_01240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmn03019]
    BB17_01240
   03016 Transfer RNA biogenesis [BR:cmn03016]
    BB17_01240
Enzymes [BR:cmn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BB17_01240
Messenger RNA biogenesis [BR:cmn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BB17_01240
Transfer RNA biogenesis [BR:cmn03016]
 Prokaryotic type
  tRNA degradation factors
   BB17_01240
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KH_2
Other DBs
NCBI-ProteinID: AID37767
Position
complement(271950..274031)
AA seq 693 aa
MAFETFSVALDKDKTLIFETGKIARQANGAVLVKMNETWVFSSACAASLSEAVDFLPFRV
DYQEKFSSAGKTSGGFLKREGRPSEKEILISRLIDRSLRPSFPNRLMQDIQVLSYVWSYD
GKTLPDPLAICGASAALAISEVPQNCIVAGVRVGLVEGKWVVNPTKDELDASKLDLVMAG
TASAVLMIEGHCDFLTEEQVLEAIAFGQKYIAKICDAIEAWQKAIGKEKQLSAVLDLPED
VQNVVSNFIREKFEKALSFRDRDALEQVSKELEESVVANLVQEESDFSLLNVKAAFKNAK
SNQMRALIRDLGIRVDGRSTTEIRPISIEVSFLPRTHGSCLFTRGETQSVAVCTLGGESM
AQRFEDLNGDGAARFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPEASRF
PYTVRVESNITESNGSSSMASVCGGCLSLMDAGVPIKAPVAGIAMGLILDQDKAIVLSDI
SGIEDHLGDMDFKVAGTEEGITAFQMDIKVEGITHEIMEQALAQAKQGRSHILNLMTQVM
SSPNDSVSRYAPRIETMQINTSKIATVIGPGGKQIRQIIERSGAQVDINDNGLINISANT
QESIDKAKELIEGLTGEVEVGKIYNGRVTSVVAFGAFVEVLPGKEGLCHISELSKQKVDN
VADFVKEGDRLAVKLLSINEKGQLKLSHKATLE
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggcttttgagactttttctgttgcgttagacaaagataagacactgattttcgagaca
gggaaaatagctcgccaagccaatggagctgttcttgtcaaaatgaatgaaacttgggtt
ttttcatcagcgtgcgcggcctctttatcagaggccgtagattttctgcctttcagagta
gactatcaagaaaagttttcctccgcggggaaaacctctggaggatttctgaaacgcgaa
ggtcgtccctccgagaaagaaattcttatttctcgactgatagatcgctctttgcgtcca
tcattccctaatagacttatgcaagacattcaagtcttgtcctacgtttggtcttatgac
gggaaaactttaccagaccccttagctatttgtggagcttctgcagctttagctatctca
gaggtccctcagaattgtattgttgcaggtgtacgcgtcggtctcgtcgaaggaaaatgg
gtagttaacccaactaaagatgagttagacgcatccaagcttgatctcgttatggcagga
acagcttctgcggtattaatgatcgaaggtcattgcgactttttgactgaagagcaagtt
ttagaagctattgcttttggacaaaaatacatagctaaaatatgtgacgctattgaagct
tggcagaaagcgattggtaaggaaaaacagctctcggctgtccttgatctgccggaagat
gtgcaaaatgttgtttcgaattttattagagaaaaattcgaaaaagcactgtcttttaga
gatagagacgctttagaacaagtctcaaaagagttagaagaatctgttgtcgccaactta
gttcaagaagaaagtgatttttctttattgaacgtgaaagctgcatttaagaatgcaaaa
tccaatcaaatgcgagctttaattagagatctcggcattcgcgtagacggacgaagtaca
acagaaattcgccctatttccatagaagtctctttccttccacgaacacatggaagctgc
ctatttacccgtggagaaacacaaagtgtagctgtatgcacacttgggggtgaaagtatg
gcacaacgatttgaagacctaaatggggatggagcagcgcgcttttatttgcagtatttt
ttccctcctttctctgtaggagaagttggtagaatcggatctccagggagacgcgaaata
ggtcacggaaaattagctgaaaaagctttaagtcatgtccttcctgaagcatctcgattc
ccttacactgttcgagtggagtctaatattacagaatccaatgggtcttcttctatggct
tctgtatgtgggggctgtctttctctgatggatgcaggagtgcctatcaaagctcctgta
gccggcattgctatgggtctaatcctagatcaagataaggctattgtcctttctgatatt
tcagggatagaagatcatctcggcgatatggattttaaagtcgcgggaactgaagaagga
atcacagcattccaaatggacattaaagtagaaggaattacccatgagatcatggagcag
gcgttggcccaagctaagcaaggtcgaagccatatcctaaatcttatgacacaggtaatg
tcttctcctaatgattctgtttccagatatgctcctcgtattgaaactatgcaaatcaat
acttcaaaaatcgcgacagtaataggtcctggagggaaacagatccgtcaaattattgag
cgatcaggagctcaagttgacattaacgataacgggctcattaacatatcagctaacacc
caagaatctatcgataaagctaaggagcttattgagggattaacgggagaagttgaggtt
ggcaagatctataacggccgagtcacttccgttgtggcctttggagcatttgtagaagtc
cttcctggtaaagagggtctttgtcatatttcagaattgtctaaacaaaaagtagacaat
gtagctgatttcgtaaaagaaggtgatcgcctagcggttaagttgctcagcatcaatgag
aaggggcaactaaaacttagccataaagcaactttagaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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