KEGG   Cucumis melo (muskmelon): 103492788
Entry
103492788         CDS       T03195                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmo03009]
    103492788
Enzymes [BR:cmo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103492788
Ribosome biogenesis [BR:cmo03009]
 Eukaryotic type
  90S particles
   Helicases
    103492788
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N AAA_22 DEAD nSTAND3 AAA_19 ATPase HTH_ABP1_N PhoH AAA_23
Other DBs
NCBI-GeneID: 103492788
NCBI-ProteinID: XP_008451537
UniProt: A0A1S3BSH7
Position
1:complement(33196468..33203975)
AA seq 1308 aa
MEDLVNDQLDCGKGSWSLDGGGSNQVMLYGSKKSDKKRKNTNKGCKGIQLNKKPKLSKSQ
KRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFS
KVGIEVPGNDQQLDRTSSDISQYESHCGSLDISPCHQLSANADEDDPFVAEKEVTCGLDS
FKDLDEVEKTGAALLEDERDLSGTMCAVGGFKGPEITDKEDGIPKVEICTTSNPLPEMRL
LSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLY
EAGFGSSQSSHQRGAIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGDSSS
IKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQRQ
IILSGGKISLEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQFPVTVHFSK
RTDIVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLMKKTSERNG
ENNNGIVETNSIQNLDMNEINEAFEDREFSIEQTDRFSSFDKDEFDINDDVSDASYNSGS
DSELEFNEDAMSDETDGHLTDVIMDDASMSSLKAAFDALDRKNALDLDKRQVDHTTDEDL
SSKQCVSARLKENVEFGFPVGALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAET
SLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYS
SAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKAL
EALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMKNLKNYDRANLVLAYSVASAAALS
TSNPFVMMFEGSQMKDELEQNDRSFELGDTKTEEKVEKSLKKKLKEAGKLSREKFSDHSS
DALTVAYALQCFELSETPVAFCNNYTLHLKTMQEMSKLRKQLLKLVFNHSRSSIAESDFS
WTNGALEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDRVAKRIREISKSVEADRKER
AGKYQACMVKENVFVNRGSSVSRSAPKFLVYNELLRTKRPYMHGLTSVQPDWLVKYASSL
CAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNVPIKDNAQGVAVFACALLKG
KVLPCLTSVREFMAARPGSILRPEALGQKRVGNLLSRLKSKKINSRATLRAVWKDNPYEL
HSEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKLGRAKEKKIKN
NT seq 3927 nt   +upstreamnt  +downstreamnt
atggaagaccttgtcaatgatcagctagattgtggaaaaggttcatggagtttggatggt
ggtggcagcaatcaagttatgttgtatgggagtaaaaagagtgataagaagagaaaaaac
acaaataagggatgtaaaggaattcagctaaataaaaaaccaaagttgagcaagtcccaa
aaaagaaagatcatgaagttggaggaggagaaggaaaagtcacttctattgtcgaaaagc
ttggagacattagagaaatataagatttcggatgatgcatttcttcttttgcgatcttct
gttaatattggtaaggatgaaacgagattggaaaaacgtagcagagatatacaattttct
aaagtaggaatagaggttccagggaatgaccagcagttggatagaacttcctctgatata
tctcaatatgaaagtcattgtggctctcttgatatttctccgtgccatcaactttctgct
aatgctgatgaggatgaccctttcgtagcagaaaaagaagtgacatgtggtctggactct
ttcaaagatctcgatgaagtcgaaaagactggtgcagctttactagaagatgaaagagat
ttatccggtactatgtgcgcagttggtggctttaaaggacctgagataacggataaagag
gacggaataccaaaggtagaaatttgtacaacatccaatccgcttccagaaatgaggctt
ttgtctaagccaattgtggtgccagtatcgaggccatgtgaagttgaagacaaacgaaaa
gatctcccgattgtcatgatggagcaggagataatggaagctatcaatgagaaccccata
gttataatatgtggagagactggttgtgggaaaaccactcaagttcctcagtttctatat
gaagctggctttggttcgtcacaatctagtcatcagagaggcgccattggggtgactcaa
cctcggcgtgtggctgttctagccactgctaaacgtgttgcgtatgagcttggtgttcgt
ctaggcaaagaggtgggctttcaagtaagatatgacaagaaaattggagatagtagctca
atcaagttcatgactgatggaattttacttcgtgaagttcagcatgattttttattgaag
cgttactctgttctaattctcgatgaggcgcatgagaggagtatgaacactgacatatta
attggaatgttgtcacgtgttgttaaacttcgtcaggatttgcatatgaagcaacgtcaa
attatactttcaggaggaaaaattagtctcgaggatatgatttttccattgaagttggtg
cttatgagtgctacattgcgagtggaagatttcatttctgggggaaggttgtttcatgtt
tcacctcccattatcgaagttcccactagacaatttcctgtaactgtacatttctcgaag
agaacagatatagttgattatatcggtcaagcgtataaaaaggttctggcgattcacaaa
aagcttccacctggaggtatacttgtctttgttactggacagagagaagttgaaaattta
tgcaagaagctacgagaagcctcgaagaagctgatgaagaaaacatccgaaagaaatggt
gaaaataacaatggcattgttgagacgaattccattcaaaatttggatatgaatgaaatt
aatgaagcatttgaagatcgtgaattttcaattgaacaaacagatcgatttagctctttt
gataaggacgagtttgatataaatgatgatgtgtctgatgcttcatacaattcaggatca
gatagtgagttggaatttaatgaagatgcaatgtcagatgagactgatggccaccttact
gatgtaataatggatgatgcaagtatgtcttctctcaaggctgcatttgatgccttagat
agaaaaaatgctttggacttggataaaagacaggttgatcacactacagatgaggactta
tcaagcaaacaatgtgttagtgcaaggttgaaagaaaatgtggaatttggttttccggtt
ggtgcattgcatgttcttcctctctatgccatgctacctgcagcagctcaactgcgtgtg
tttgaagaagtcaaggaaggagagcggcttgttgttgttgctactaatgttgctgaaact
tccttgactatcccaggcataaaatatgtggtggatactggtagagaaaaggttaaaact
tataactcctccaatgggattgaaaattatgaagtgcaatggattagtaaggcttcagct
gctcaaagggctggaagagctggaaggacagggccggggcattgttatcgtctctattct
tctgcagtttttagtaatacactccctgacttttctctcgctgaaatagctaaaatacca
gtcgatggcgtcgtccttcttatgaaatcaatgggcatcagtaaggtggtcaattttcca
tttcctactcctcctgagacatcagcggtacttgaggctgagagttgcttgaaggctctt
gaagcccttgatagtggtggaagattgacagccttggggaaggcaatggctcagtatcct
ttgagtccgcgccactctagaatgctacttacagttattcagattatgaaaaatttgaaa
aattatgaccgagcaaatctcgttcttgcatactctgttgcatcagctgcagctttgagc
acgtctaatccttttgtaatgatgtttgaaggaagtcaaatgaaggatgagttagaacaa
aacgacaggtcttttgaacttggtgacacaaaaactgaagaaaaagtggagaagtcgttg
aaaaagaagttaaaagaagctggtaaactctctcgtgaaaaattttcggatcatagtagc
gatgctttgactgtagcttatgctttgcaatgttttgaactttctgaaactcctgtggca
ttctgcaacaactacacattacatctaaaaactatgcaagaaatgtccaagttgagaaag
caactattaaaacttgttttcaatcatagtcgttcttctattgctgagtccgatttttcg
tggactaatggggctttggaggatgtagaagctatgtggagggtcccatccaataaacat
cctctttcattgaaggagaaggagataattggccaagcaatctgtgcaggttggccagat
agggttgccaaacgtattagagagatttccaagtcagttgaagctgacagaaaagaacgt
gctggaaagtatcaagcttgcatggtaaaagaaaatgtgttcgtcaatcgagggtcatct
gtttctcgttcagccccaaaatttttggtgtacaatgaattattacgtacaaaacgacca
tacatgcatggattgactagtgtacaaccagattggctagtgaaatatgctagttccttg
tgtgctttctcagcacctttaacagatcctaaaccatattacgactctcaaaatgacaca
gtgtattcatgggttgctcctacgtttggcccgcatctttgggagcttcctttacataat
gtcccaattaaagataacgctcagggagttgcagtgtttgcatgtgctctgcttaaaggg
aaggtgttgccatgcttaacatctgtacgtgagttcatggcagctcgtcccggtagtatc
ttaaggccagaggcattaggccaaaaaagagtggggaatcttctatcaagattgaaatcc
aagaagataaacagtcgtgccacattgagagcggtttggaaggacaatccatacgaactc
cattcggaaatcttggattggttccaaaagagttatcacagtcactttgaagacctttgg
tcacaaatgctttgtgaagtacaattgccccaaaaacgtctcatcaagaagttgggaagg
gccaaggaaaagaaaataaaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (12)   
   Pfam (12)   
All databases (45)   

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