KEGG   Cucumis melo (muskmelon): 103493544
Entry
103493544         CDS       T03195                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103493544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103493544
   03041 Spliceosome [BR:cmo03041]
    103493544
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103493544
Spliceosome [BR:cmo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103493544
SSDB
Motif
Pfam: FmiP_Thoc5 Cortex-I_coil
Other DBs
NCBI-GeneID: 103493544
NCBI-ProteinID: XP_008452557
UniProt: A0A1S3BTI6
Position
7:2310628..2315697
AA seq 818 aa
MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL
RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI
KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKR
RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDA
PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFEC
LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD
PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISK
SITPQTNYSRMLSFNKHDEDYELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDY
GSKEYCLILTRNTEQPAKNLKLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDW
YNELRAMEAEVNLHILKMLPLDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVID
VGLCKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggacgaggagatagaggaaggaatgctcatagaagacgagaccgcgcccctgccgcca
gacagcgaaacgggcaaaatttctccctttgaaatgctccgagagagcaaaagttgtgtg
gaagacatcgtcaccaagatgctctccatcaagaagcatggcgagcctaaaactcagctc
agagaactcgttacccagatgttccttcacttcgtaacccttcgccaggcaaatcggtct
attctgctggaagaggatcgagtgaagtctgaaacagagcgagcaaaagctccagttgac
ttcacgactctgcaacttaacaacttgatgtacgaaaagagtcactatgttaaagcaata
aaggcatgcaaagacttcaaatcaaagtatcctgatattgaacttgtttctgaggatgag
tttttccgggatgctcccgaaaacattaagaactccacgaggtcgaaggacagcgcgcac
aatctgatgctgcagaggcttgactatgagcttttccagcgcaaagaactttgcaaacgg
cgagatgaacttgaacagcataagaaaagcctactagaagtcattgctaatagaaagaaa
ttcttgtcaagtcttccctcacacctcaagtccttgaaaaaggcatccttgcccgtgcaa
aatcagttggggatattgcagacaaagaaattaaagcaacaccaactagcagagctactt
ccacctcctctgtatgtaatctactcgcaattcttggcacaaaaggaagcctttggtgaa
aatatagaattggagatagtaggaagtatcaaagatgcccaagcttttgcacgccatcaa
gcgaataaggaaactggttcatcaaacaatgctgagagcaacaagttggaggatgatgcc
cctgacgaagacgatgatggccaaaggaggagaaaacggccaaagaagattccagctaag
gtgaacattgagcatgcagggatatatcaagtccatcccctaaaaatcatccttcatata
tatgacaatgaaatatgtgaacccaagtcaatgaaattgctttctctgaagtttgaatgc
ttgttaaagttgaacgttatatgtgttgggattgaaggatctcatgaaggtcctgagaat
aacatcttatgcaacttgttccctgatgatactggccttgagctgcctcaccagtcagcc
aagcttgttgttggtgaaacacttgcatttagtgataagagaacctctcgaccatacaag
tgggcccaacatttggctgggattgattttttgccagaattgccaccgttggtgagtgca
caagaatctgtcagtggtgaacctgttagaggtgatattgtatcgggcctctcaatgtat
cggcagcagaaccgaatacagacagtagtgcaaagattacgctctcggaagaaggctcag
ctggctcttgtggaacagcttgattcacttgaaaaactcaaatggccagttctgacatgt
gatgaggtcccatgggtttcacataaaccttcgtgctgtttgcaaggttggtcgctcgta
ggttactctacaaagcaggcatcatctttgactacaatggagaaagagaaagttcaggat
cctgtagatgttgatatggttggaaaatctggtatttcaagagaagagattgacagtgct
agggaagatggggaactccctgctcttgtttcatctacgcctatcttaaataatactgaa
gttacatccttaagaacacccaatcttgagcattccaaacagttgactttaatttccaaa
agcattacaccacaaactaattactctaggatgctaagtttcaataaacatgatgaagat
tatgagttgatgatagatgttgacagtgaccgggatgatcctgtgcaagctgagcttgca
gcagatgatgtagcatctgttccttccaacgacataacaagaaagaaatggatagattat
gggtccaaggaatattgccttattcttaccaggaacactgagcaacctgccaaaaatctt
aaattgcaagccaagattaagatcagcatggagtaccctcttaggcctcctgtcttcact
ttgaatctctacacaatgaattctgaagaaaactgtgaagagagtgatgactctgattgg
tataacgaacttcgagccatggaagctgaggtgaatctccatatacttaagatgctgcct
ttggatcaagagaactatatattgtctcatcagattcgctgtcttgctatgctgtttaac
tactgcatcagcgaggcatccctttcctcggaaagaagaaagagtagttctgtaattgac
gttggattgtgcaaacctgttagtggtagtttacatgccagatcgtttagaggaagggat
cgtagaaagatgatatcctggaaagatattgaatgcactccgggctatccttgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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