KEGG   Cucurbita moschata (crookneck pumpkin): 111447420
Entry
111447420         CDS       T05248                                 
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030  DNA replication
cmos03410  Base excision repair
cmos03420  Nucleotide excision repair
cmos03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111447420
   03410 Base excision repair
    111447420
   03420 Nucleotide excision repair
    111447420
   03440 Homologous recombination
    111447420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmos03032]
    111447420
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111447420
Enzymes [BR:cmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111447420
DNA replication proteins [BR:cmos03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     111447420
DNA repair and recombination proteins [BR:cmos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     111447420
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     111447420
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 111447420
NCBI-ProteinID: XP_022942350
UniProt: A0A6J1FW48
Position
Unknown
AA seq 1127 aa
MMTLGVSSSQASSLRAQWPAYFFLWRSNSVSSSSISFCASSKALCRAEFGPLKSVGGVSS
NMKTFHASCQCRQSSFLSTNSFVETRQYDNERAFLSDVKAWSKSTMRLKEEKHLRFMETE
ILTTNDEEKLRNEEHLIGYGTSHSKIQSNLGSKLSNANKDSDCINPSTNMLSDGFRKQGP
MSFEQLQNVETIEGMMISDRTLSLDTIKVSSDRCNGNISSYSGEQTMTKPANNDLHNQVI
PMRSNKNYTFSQNGKGSIMHRSSNVSPNGRKQSIPLGKMDSLPKTLKLTEAANGLKRGAA
VEEFSKMTINGGGTKITEAPATSHKPDIKERLNGVYDSVLVVDSIQAAREVVSMLTMKYR
NLVHACDTEVAKIDVKQETPVDHGEIICFSIYSGPTADFGNGKSCIWVDVLDGGGKEILL
QFAPFFEDPSIRKVWHNYSFDNHIIENYGIKVSGFHADTMHMARLWDSSRRINGGYSLEA
LSGDTKVMSGAKLGQEKELIGKISMKSIFGRKKMKKDGSEGKIIVIPPVEELQREEKKLW
VSYSGLDSICTLKLYESLKNKLSDMPWERNGEMIPNKTMFNFYEEYWQPFGELLVKMETE
GMLVDRPYLAKIEKLAIAEQQVAANRFRNWASKYCPDARHMNVGSDAQLRQLLFGGTSNS
KNPDESLPTERTFKVPNTENVIEEGKKTPSKFRNINLKRISVEDLSTEMYTATGWPSVSG
DALKVLAGKVSAEYDYFTDDLQSDNEFGDDSETTSHEENKKHIIHESANMSDYGAALKAF
GSSEKGREACHAIAALCEVCSIDSLISNFILPLQGSNISGKNGRIHCSLNINTETGRLSA
RRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLANCKSMLEAFKAGG
DFHSRTAMNMYPHIRKAVEDGSVLLEWDPQPGEDKPPVPLLKDAFGSERRKAKMLNFSIA
YGKTPVGLSKDWKVTVEEAKQTVDLWYNERKEVRTWQNLRKREAEEKSCVRTLLGRARRF
PSMTHATRAHKGHIERAAINTPVQGSAADVAMCAMLEISNNSRLRELGWRLLLQVHDEVI
LEGPTESAEVAKAIVVECMSKPFNGKNILNVDLAVDAKCARNWYSAK
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgatgactttgggggtctcctcttcccaagcctcttctttgagagctcaatggcctgct
tatttctttctatggcggtctaactctgtttctagctcttctatttccttttgcgcctcc
tccaaggctctatgcagagctgaatttggtcccctgaagagtgttggtggtgtttcttca
aatatgaagacgtttcatgcatcttgtcagtgcagacaaagttctttcttgagtacaaac
tcatttgttgaaactagacaatacgacaatgagagggcgtttctctctgatgtaaaggca
tggtctaaaagtactatgcgactgaaggaagagaagcacttaaggtttatggaaactgag
atcctgacaacgaatgatgaagaaaagctaagaaacgaagaacatctcattggatatggg
acttcacactctaagattcagtcaaatttgggaagcaaactttccaatgcaaataaggat
tctgattgtataaacccttcaactaatatgttatcagatggattcaggaaacaaggacct
atgagttttgaacaacttcagaatgtcgaaactatagaagggatgatgattagtgatagg
acactttcacttgacacaatcaaggtttcaagtgacagatgcaatggaaacattagttct
tattctggggaacagaccatgaccaagcctgcaaataatgatttgcataatcaggtcatt
cctatgcgaagtaacaaaaactataccttttctcaaaatggaaaggggtccattatgcat
cgctcatcaaacgtttcacctaatggcagaaagcaaagtatccctttgggaaagatggat
agtttaccaaaaactttgaaattgactgaagctgctaatggactaaagaggggtgcagct
gtggaagaattttctaaaatgaccattaacggtggtggcaccaagattacggaagcacct
gcaactagtcataaaccagatataaaggagaggcttaatggtgtatatgatagcgttctt
gttgttgatagtatacaagcagcaagggaagttgtttcaatgcttactatgaagtacagg
aatcttgtgcatgcttgcgatactgaggtggccaagattgatgtgaagcaagaaacaccc
gttgatcatggtgaaataatatgcttcagtatttattcaggaccaacagcagattttgga
aatggaaagtcttgcatctgggttgatgttcttgatggtggcggtaaggagattttgctt
caatttgcaccattcttcgaagatccttcgatcagaaaggtatggcacaactacagcttt
gacaatcacattattgaaaattatgggattaaggtttctggcttccatgctgacacaatg
cacatggctcgattatgggattcgtcaagacgaataaatggtggatattctcttgaagct
ctttctggtgatacaaaggtcatgtctggggctaaattgggccaggaaaaagagttgatt
ggtaaaatatccatgaaatctatctttggccggaagaagatgaaaaaggatggatctgaa
ggcaaaattatagttattcctcctgttgaagaacttcaacgagaagaaaagaaactatgg
gtatcgtattctggtttagattcaatatgcacgctgaagctttatgagagcttgaaaaat
aaactgtctgacatgccttgggagagaaatggagaaatgattccaaataaaacaatgttc
aacttttatgaagaatattggcaaccatttggtgaacttcttgtcaaaatggaaactgag
ggaatgctggttgataggccatatcttgctaagatagaaaagttggccatagcagaacaa
caggttgccgctaacagatttcgtaactgggcttcgaagtactgccctgatgccagacat
atgaatgtaggaagtgatgcacaattgcgccaactgctcttcggtggtacttctaacagt
aaaaaccccgatgagtctcttccaactgaaaggacattcaaagttcctaacactgaaaat
gtcattgaagaagggaagaaaactcccagtaagtttcggaatattaatttaaaaagaatt
agtgtggaggatctttcaacagaaatgtacacagcaactggttggccgtcagtgagtggg
gatgctctaaaggtcttagcgggcaaggtctctgcagagtacgattacttcactgatgac
ttgcagtctgacaatgagtttggcgatgattctgagacaacgtctcatgaagaaaataaa
aagcatattattcatgaaagtgcaaatatgtctgattatggagctgctcttaaagcattt
ggatcaagtgagaagggcagggaagcctgtcatgccattgctgctttatgcgaagtctgc
tccattgattctttgatatcaaatttcatccttcccttgcagggaagcaatatatctgga
aagaatggacgcatacattgttctctaaatatcaacacagaaactggccgcctctcagct
cgaagaccaaatttgcagaatcaaccggctctggaaaaggaccggtacaaaatccgtcag
gcatttatagctgcccctggaaattccctcattgttgctgattatggccagttggaactt
aggattcttgctcatcttgccaattgtaagagcatgctggaagcctttaaagctggggga
gatttccattcaaggaccgcgatgaatatgtaccctcatattcgtaaagctgttgaagat
ggaagcgtgcttcttgagtgggatcctcaaccaggggaagataagcctccagttccattg
ttgaaggatgcatttggttctgaaagaaggaaagccaaaatgctcaatttttccattgca
tatgggaagactcctgttggcctttccaaagattggaaggttacggtggaggaagcaaag
cagacggttgacttgtggtataatgaaagaaaagaggttcgtacttggcaaaatcttcga
aagagagaagctgaggagaaatcatgtgttcgtacattgctgggacgagcacgtcgcttt
ccatcaatgacgcatgctactcgtgcccataaagggcatatagaaagagctgctatcaat
actcccgtgcagggtagtgctgccgatgttgccatgtgtgccatgttggaaatatctaac
aattcacgtttgagggaacttggatggagattgcttttgcaggttcacgatgaagtgatc
ttggaaggaccgaccgagtctgcagaggttgctaaggccattgtcgtcgagtgcatgtcg
aaacccttcaacggaaagaacattctcaacgttgaccttgccgtggatgccaagtgtgcg
cgaaactggtactctgccaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system