KEGG   Cucurbita moschata (crookneck pumpkin): 111451051
Entry
111451051         CDS       T05248                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013  Nucleocytoplasmic transport
cmos03015  mRNA surveillance pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111451051
  09122 Translation
   03013 Nucleocytoplasmic transport
    111451051
   03015 mRNA surveillance pathway
    111451051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111451051
   03041 Spliceosome [BR:cmos03041]
    111451051
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     111451051
Spliceosome [BR:cmos03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    111451051
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 111451051
NCBI-ProteinID: XP_022947066
UniProt: A0A6J1G5C4
Position
Unknown
AA seq 251 aa
MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGG
SHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFESRRNSNHESRPEKNPRFRESGDSD
EEDDDDRKQRH
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcttcactgttcaaggacccatcaaagctctctgtttatcgggatagaagatttcag
ggaacacaagatgaatttgaacatgcactgctgtcttcaaccaccgtttatgtgggaaat
atgtccttttatacgactgaagaacaagtttatgagctcttttctcgagccggagaaatt
aagaagataatcatgggtttggataagaattcaaaaacaccttgtggcttttgttttgtc
ctatactattctcgggaggatactgaggatgctgttaaatttataagtggaacaattctt
gatgatcgtcctattcgtgtggattttgattggggatttcaggatggcagacaatggggc
cgtggtcgaagtggtgggcaggtgcgtgatgaatatcgaacagactatgatcctggtaga
ggtggttatggaaagttagttcagaaagagttagaagcacagaggcagcttgtggattat
ggtactgattcactaggctctatgccgccagtcatgtctcagcatggaaaccatggtgga
agccacggacatgggtatcgtcatggtagagattaccaccaccgtaagcgccaccgggat
gatgatcgccatgcccatgaaagctctaagagaacttcagattttgagtctagaagaaac
tccaatcatgaatccagaccggagaagaatccaaggtttcgggagagtggcgattctgat
gaagaggatgacgatgatcgaaagcagcgacactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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