KEGG   Cordyceps militaris: CCM_04269
Entry
CCM_04269         CDS       T03108                                 
Name
(RefSeq) flavodoxin and radical SAM domain protein
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
cmt  Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmt03016]
    CCM_04269
Enzymes [BR:cmt01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     CCM_04269
Transfer RNA biogenesis [BR:cmt03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    CCM_04269
SSDB
Motif
Pfam: Wyosine_form Radical_SAM Flavodoxin_1
Other DBs
NCBI-GeneID: 18166292
NCBI-ProteinID: XP_006669480
UniProt: G3JE72
Position
Unknown
AA seq 773 aa
MDPLGSGYGQSALFNINGLLDVWHTNRTPIILFALCGLLVLRLYLHVYEEKSDLKTIPKI
YEKANPQNSDTVLPRQVQEKTLVKAAGPRRIKGGVAKKSETSEEPVDLNKPVKVLVFFSS
ITTKTEKIGRDFIARLEKSVTQIAAETKRPVLAPELLDLTEIDFDDYFIAPPTSDVGAQF
LYLFLIPSYNIDSINDTFLEHLQETHHDFRIDTAPLSPLLGYSVFGFGDREGWPDEAEGY
CFQAKELDKWMAKLTARKRAYPVGMGDMKSDHAERFIEWTSGVEEVFDHVIRTGHLGQGV
PGSGAAVESDDEIEEDYDDGEVVFDEENPPKRENGKTSSSLDDVEDLGRVIKSQAGDANP
KAPIAVDFTTYNSKGNAQSKVKEMVAKNSPTYAALTKQGYAIVGSHSGVKICRWTKSALR
GRGSCYKYSLYGINSHQCMETTPSLSCSNKCVFCWRHGTNPVGTTWRWVVDPPELIFDGV
KENHYKKIKMLRGVPGVRAERFAEALKIRHCALSLVGEPIFYPYINEFLGMLHKERISSF
LVCNAQHPDELANLKAVTQLYVSIDASNKDSLRKIDRPLHRDFWERFNRCLDILREKRFR
HRTVFRLTLVKGFNVEDEAAGYARLIEQGLPCFVEIKGVTYCGTSTSSNAGLTMSNVPFY
WEVCDFVRALDKRLQEKGLAYGIAAEHAHSCCVLLASERFHVNGKWHTHIDYDRFFELLE
ERGPDGDWTPEDYMGPPTPEWALWGNGGFDPRDERVDRKGRKKEAIVIREAPE
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggatcctctgggcagcggatatgggcagtctgctctgttcaacatcaatgggctgctc
gatgtctggcacactaatcgaactcccattattctttttgcactttgcggccttcttgtg
cttcgcctttacctccacgtatacgaagagaagtcggacctgaaaaccattcccaaaatc
tacgaaaaggcgaatccccaaaattcagataccgtgctcccgcgacaagtacaagaaaag
actctcgtcaaagccgccggtccgcgcaggatcaaaggcggcgtggccaaaaagtccgag
acaagcgaagaaccagtcgatctgaacaaaccggtcaaggttcttgtcttcttctcctcc
attaccacaaagacggaaaaaattggccgagatttcattgcaaggctggagaagtctgtc
acgcagattgccgccgaaaccaagcgcccagttcttgcgccagagcttctcgacctgacc
gagattgattttgacgactactttatcgcacccccaacgagcgatgtcggggcgcaattc
ctctacctattcctcataccgagctacaacatcgactctatcaatgacacattccttgag
catcttcaagagacgcatcacgactttcgaattgacacggcacctctctcgccacttctg
gggtactctgtgtttggatttggtgatcgcgaaggctggcctgatgaggcagaaggctac
tgcttccaggccaaggagttggacaaatggatggcaaagctgactgcgcgcaagagagcc
taccccgttggcatgggtgatatgaagagtgaccatgctgagcgcttcatcgaatggaca
agcggtgttgaagaagtctttgaccacgtcatccgcactgggcacctaggccaaggtgta
cctggtagtggcgcggccgtggaaagcgatgatgagatagaagaagactacgatgatggt
gaggtggtttttgacgaggagaaccccccaaaacgtgaaaatggcaagacgtctagcagc
cttgacgacgtggaagatctgggacgcgtgatcaagtctcaagctggtgatgccaacccc
aaagcccccattgctgttgattttaccacatacaactccaaaggcaatgctcaaagcaag
gtcaaggaaatggtcgccaagaactcccctacttatgctgccctcacaaagcaaggctat
gctattgttggatcgcattccggagtcaaaatttgtcggtggaccaaatcggctctacgt
ggccgaggcagctgctataaatactccctatacggtatcaactctcaccagtgcatggag
acaacgccatcactctcgtgctccaacaagtgcgtattttgctggcgtcacggcaccaac
cccgttggtactacttggcgctgggtagttgacccgcccgagctgatctttgacggtgtc
aaggaaaaccactacaagaagattaaaatgctgcgtggtgtgccaggtgttcgtgcggag
cgttttgcggaagccctcaagatccgtcactgtgcgctctccctggtcggagagcccata
ttttacccctacatcaatgaattcctcggcatgctgcacaaggagcgcatttcctccttc
ctggtgtgtaacgcacaacatccagacgagctggccaacctcaaggctgtgacacagctc
tacgtctccattgacgcgtccaacaaggactcgctgcggaagattgaccgccccttgcac
cgtgacttttgggagcgcttcaaccgctgcctggatattctccgcgagaagcgcttccgg
caccgcaccgtcttccgcctaaccctcgtcaaggggttcaacgtcgaggacgaggcggcg
ggctacgctaggctcatcgagcagggactgccctgcttcgttgagatcaagggtgtcacg
tactgcggcacgtcgacatcttccaatgccggactcaccatgtccaacgtgccgttctac
tgggaggtctgcgacttcgtgcgcgcgctggacaagcgcctccaggaaaagggcctcgcg
tacggcatcgctgccgagcacgcccacagctgctgcgtcctgcttgccagtgagcgcttc
cacgtcaacggcaagtggcacacccacattgactatgaccgcttttttgagcttctagag
gagcgcggccccgacggcgactggacgcccgaggactacatgggcccgccgacgccagag
tgggcgctctggggcaatggaggattcgaccctcgtgatgagcgtgttgatcgcaaggga
agaaagaaggaagcaattgtcatccgcgaggcccccgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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