KEGG   Chelonia mydas (green sea turtle): 102929730
Entry
102929730         CDS       T02989                                 
Symbol
ITGA4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-4
  KO
K06483  integrin alpha 4
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04510  Focal adhesion
cmy04512  ECM-receptor interaction
cmy04514  Cell adhesion molecules
cmy04672  Intestinal immune network for IgA production
cmy04810  Regulation of actin cytoskeleton
cmy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102929730 (ITGA4)
   04514 Cell adhesion molecules
    102929730 (ITGA4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102929730 (ITGA4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102929730 (ITGA4)
   04810 Regulation of actin cytoskeleton
    102929730 (ITGA4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102929730 (ITGA4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmy04147]
    102929730 (ITGA4)
   04515 Cell adhesion molecules [BR:cmy04515]
    102929730 (ITGA4)
   04090 CD molecules [BR:cmy04090]
    102929730 (ITGA4)
Exosome [BR:cmy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102929730 (ITGA4)
  Exosomal proteins of other cancer cells
   102929730 (ITGA4)
Cell adhesion molecules [BR:cmy04515]
 Integrins
  Integrin alpha subunits
   102929730 (ITGA4)
CD molecules [BR:cmy04090]
 Proteins
  102929730 (ITGA4)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 FG-GAP_3 Integrin_alpha Psg1
Other DBs
NCBI-GeneID: 102929730
NCBI-ProteinID: XP_027687698
Position
11:46194478..46250640
AA seq 1030 aa
MRVWERRRGGLASGGAPVWAALLLLLRTAHAYNLDTRHPVVFQGLNGTLFGYSVVLYSHG
TSRWLVVGAPKAKWLANSSVVNPGAIFRCRIGSNPSGTCEQLQLGNPAGDYCGKTCFEER
DNQWLGVSLSRQPRENGTIVACGHRWKNIYYIKNEHKLPNGVCYEIPPDFRTQLSKRISP
CYKDHVRKFGENHGSCQAGMSSFYFKDLIIMGSPGSYYWTGSVFVYNTTANTFQAYTDVR
NQVKFGSYLGYAVGAGHFLTPASTEVIGGAPQQEQTGKAYIFSIGTRGLNILSELKGKKL
GSYFGAAVCAVDLNTDGLSDLLVGAPMQSKVREEGRVYVYINSGSGAEMLELEIELAGSD
FYAARFGESIANLGDIDNDGFEDVAIGAPQENNLEGAIYIYNGRKDGISSSFSQRIQGHR
ISNTLSMFGQSISSGIDADNNGYPDVAVGAFLSDSAVLLRTRPVVVVEASLKHPNAVNRT
NLECVENGQPAVCVNLMLCFTYKGQDVPGFVVLLYDLSVDVSRKTNTPARFYFSSNGTSD
MVSGSMQIYNSNVTCKSHPAFLKKDVRDILTPIHLEATYRLGHHVLRKRSVEEFPPLEPV
LQQRKEKDTIKNKMVFARFCSRENCSADLKVSGKLAFSKLHEKKTYLSVGSMKTLLLNIS
LSNAGDDAYETALDIQLPKGLYFVRVLEQEETQIHCKISDNEAHAMRLYCSVGYLYVDHL
SKMDFSFLLDASSLTRAEDDLSITVNATCENEEDKDLLLDNSITLVIPLKHEVELNVHGF
VLPASFVYGPSERNSSINCMEEKINFIFHVISAGPSMAPAIDLEIMVPNAFAPRDEKLFN
ILDIQTTDGECFYDNYTRDCALPEKNGHMNVLKDLIIFFSKPTQRRLYCMKDDHLCLRIL
CKFGNMESGKEAIVQMQLEATPSVLEMDEASSLEFEISATASPEKNPKVIELHKEKQVAH
VFLEGLHNQKPKHHVTMLIIGIGSVFGILLFLLIVLLLWKSGFFKRRYQPIPQEQXQRGS
WNFVNSNKED
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgcgggtctgggagaggcggagaggggggctcgcctcaggaggggcgcccgtgtgggct
gcgctgctccttctcctgaggactgcccacgcctacaacctggacacacggcaccccgtg
gtcttccaggggctcaacgggacgttatttggctattcggttgtgttgtacagtcatggc
actagtagatggttggttgtgggagcccctaaagccaaatggttggcaaatagctctgtg
gtcaatccaggtgcaattttcagatgcaggatcggaagcaaccccagtgggacttgtgaa
cagctccagctgggcaatccagcaggagactattgtggaaagacctgttttgaagagaga
gataatcagtggctgggtgtcagcttgtcaaggcagccaagggaaaatggaaccattgtt
gcatgtggacataggtggaaaaatatatattacataaaaaatgaacacaaactccctaat
ggcgtttgttatgaaattcctcctgattttcgaacacagctaagtaaaagaataagtcca
tgctataaagatcatgtgcgaaagtttggagaaaaccatgggtcatgtcaggctgggatg
tctagtttttactttaaggatttaattataatgggatccccaggatcatattattggact
ggttctgtctttgtgtacaataccactgcaaatacctttcaagcttatacagatgtgagg
aatcaagtaaaatttggaagttacttaggatatgctgttggagctggccactttctgaca
ccagctagtacagaagtaattggaggagctccccaacaggagcagactggtaaagcatac
atttttagcattgggacaaggggattaaatattctgtctgaactaaagggtaaaaagctt
ggttcttattttggagctgctgtttgcgcagtggatctgaataccgatggcctctcagac
ttactggttggcgctccaatgcaaagtaaagtcagagaagaaggaagggtttatgtttac
atcaactcaggttctggagcggagatgctagaattggagatagaactagctgggagtgac
ttctatgcagcgaggtttggagaatccatcgctaatctaggagacattgataatgatggt
tttgaagatgttgccattggggctccccaggaaaataatctcgaaggagcaatttatata
tataatggcaggaaggacgggatatcttcatccttctcgcagagaatacaaggacacaga
atcagcaacactttaagcatgtttggacaatccatatcaagtggcattgatgcagataac
aatggttatccagatgtagcagttggtgcctttctcagtgattctgccgtgctgctgaga
acaagaccagtggtggttgttgaagcgtctttaaaacaccctaatgctgtaaatcgaact
aatttggaatgtgtggaaaatggccaacctgctgtgtgtgtgaatttaatgctttgcttt
acctataaaggacaagatgtccccggttttgttgtgctgctttatgacctaagtgtagat
gtaagcagaaaaacaaacactcctgcaagattttacttttcttctaatggaacatcagat
atggtctcaggaagtatgcagatttacaacagcaatgttacctgcaaaagtcatccagca
tttttgaagaaagatgtaagggatatcctgactcctatacaccttgaagcaacttatcgt
cttgggcatcatgttctaaggaaaagaagtgtggaggaattcccaccacttgaaccagtt
cttcagcagaggaaagaaaaagacactataaaaaacaagatggtttttgcaagattttgt
tccagagaaaactgttctgctgacttgaaagtttctggaaaacttgcattttcaaaactt
catgaaaagaaaacatatctttcagttggaagtatgaagactttactcttgaatatatca
ctaagcaatgctggagatgatgcatatgaaactgccctcgacatccaactccctaaaggt
ctttattttgtcagagttctagaacaggaagaaacacagatacattgcaaaatctccgat
aacgaagctcatgcaatgagactttactgcagtgttgggtatttatatgtagatcatctg
tcaaagatggattttagttttctcttggatgcaagctcacttaccagggcagaagatgac
ctcagcatcacagttaatgctacctgtgaaaatgaagaggataaagacctgctgttggat
aactccataactttagtcatacctctaaaacatgaggtcgagctaaatgtccatggattt
gtattaccagcttcatttgtttacggacccagtgagagaaattcatcaattaattgtatg
gaggagaagatcaacttcatattccatgttatcagtgctggaccgagcatggctcctgct
atagatttggagataatggttcctaatgcttttgcaccaagagatgaaaagctgtttaac
attctggatatccagacaactgatggagaatgtttttatgataattatacaagagactgt
gctttaccagaaaaaaacggacacatgaacgtattaaaggatctcatcattttcttttca
aagcctactcagaggcgactgtactgcatgaaagacgatcatttgtgtttacgaatactg
tgtaaatttggaaacatggaaagtggaaaagaagcaattgtccagatgcaactggaagct
actccttcagttttagaaatggatgaggcatcatcacttgagtttgaaataagtgctaca
gcatcaccagaaaaaaatccaaaagtcattgaactacacaaggaaaagcaagttgcacat
gtctttttggaaggactacataaccaaaagccaaaacatcatgttaccatgctgattatt
gggataggttcagtatttggcattttattgtttttgcttatagtgctgttactctggaag
tctggcttctttaaaagacgttatcaacctatcccacaagagcagncccaaagaggaagt
tggaactttgtaaacagcaataaggaggactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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