KEGG   Chelonia mydas (green sea turtle): 102935002
Entry
102935002         CDS       T02989                                 
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102935002 (MID1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmy04121]
    102935002 (MID1)
Enzymes [BR:cmy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102935002 (MID1)
Ubiquitin system [BR:cmy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102935002 (MID1)
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX PRY zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-RING_2 Pur_ac_phosph_N zf-C3HC4_2 zf-RING_5 Mannitol_dh
Other DBs
NCBI-GeneID: 102935002
NCBI-ProteinID: XP_027678366
Position
1:complement(130537676..130855206)
AA seq 706 aa
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKGGMVEQHSRSSDAFPNLSSK
NWTKSLMQTGCHEISVSGWQNLENNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQETK
LTEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQSLK
ENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTA
PNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVP
NIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLKTNSQPFKLDPKSAHRKLKVSH
DNLTVERDETSSKKSHTPERFTSQGSYGIAGNVFIDSGRHYWEVVISGSTWYAIGISYKT
APKHEWIGKNSASWVLCRCNNAWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSLAFYDAL
NSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggaaacactggagtcggaattgacctgccctatctgtctggagctgtttgaggaccca
ctgctgctgccttgtgctcacagcctctgtttcaactgtgcgcatcgcatattggtctcc
cactgtgccaccaacgaatcagtggaatccatcactgccttccagtgccctacttgtcgt
tatgtcatcactctcaatcaacgtggtctagacggactgaagcgcaacgtcaccctgcag
aatattatcgacaggtttcagaaagcgtcagtgagtgggcccaattctcctagcgaaacc
cgccgagagcgggcatttgatagcaacagcatgtcatccagtgaaaaagttctctgccag
ttctgtgaccaggaccctgcccaggaagcagtgaagacctgtgtcacttgcgaggtgtcc
tactgcgaggagtgcctgaaagcgactcacccgaacaagaagccattcacgggccaccgt
ttgatagagcctattccagactctcacatccgaggattaatgtgtctggagcatgaggac
gagaaagttaacatgtactgcgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttggacggcatcgtgatcatcaggtggcagctttgagtgagcgctatgacaaattaaag
gggggaatggtggagcagcactccagaagttcagatgctttcccaaacctctcgtctaaa
aactggactaaaagtctcatgcaaacaggatgtcatgagatttctgtttctggctggcaa
aatttggagaataacctcacgaaccttattaagaggaatactgaactggaaactctcttg
gctaaactcattcaaacctgccaacatgtggaagtgaatgcatcgcgacaagaaaccaag
ctgacagaggaatgtgacctgctcattgaaataatccaacagagacgacaaattattgga
accaaaataaaggaagggaaggtggtgagactgagaaaactggctcagcagattgcaaac
tgcaaacagtgcattgaacgctctacatctctcatctctcaggccgaacagtctctgaag
gagaatgatcatgcacgcttcttgcagacggctaaaaatatcactgagagggtctccatg
gctactgcatcctctcaagtgttaatccctgaaattaatctcaatgatactttcgatact
tttgcgcttgattttaccagggagaaaaaattgctggaatgcctcgattatcttacagct
cctaacccgccaaccattagagaagagctctgtacagcttcttacgacacaatcactgtc
cactggacctcagatgatgagttcagtgtggtctcatatgagctgcaatataccatcttt
actggacaagctaatgtagttagtttatgtaactcagccgacagttggatgattgttcca
aatatcaaacaaaaccactacacagtgcatgggttacagagtggcactaagtacatcttc
attgtcaaggccattaatcaggcgggcagccgaaacagtgagccaggcaagctgaagaca
aacagccagccatttaaactggaccccaagtctgcccacagaaagttgaaggtgtcccat
gataacctgacagtggagcgtgatgaaacttcttccaaaaagagccacacacccgagcga
ttcaccagccaagggagctatggaatagctggaaatgtgtttatcgacagtggacggcat
tactgggaagtggttataagtgggagtacatggtatgcaattggtatttcttacaagacc
gcgccaaaacatgagtggatcggaaagaattctgcctcttgggtgctttgccgttgtaat
aatgcctgggtggtgagacataacagcaaagaaattcctatcgagcctgctcctcacctc
cgtcgtgttgggattttgctggactacgacaacggttcccttgccttttatgatgctttg
aactctctacacctttacacttttgacataacctttgcacagcctgtgtgccccacattc
actgtgtggaataaatgtttgacaattataacaggcctgcctatcccagatcacttagac
tgcactgagcagcttccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (14)   
   Pfam (14)   
All databases (47)   

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