KEGG T02989: 102940288

Chelonia mydas (green sea turtle): 102940288

Entry

102940288         CDS       T02989

Name

(RefSeq) sodium channel protein type 2 subunit alpha isoform X4

K04834

voltage-gated sodium channel type II alpha

Organism

cmy Chelonia mydas (green sea turtle)

Brite

KEGG Orthology (KO) [BR:cmy00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cmy04040]
    102940288
Ion channels [BR:cmy04040]
Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102940288

SSDB

Motif

Pfam:

Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQCJ-SCHIP1 ATP-synt_B IQ Neur_chan_memb K_channel_TID

Other DBs

NCBI-GeneID:

102940288

NCBI-ProteinID:

XP_007056692

Position

11:35747622..35871888

AA seq 2008 aa
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKQERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINVISYFNSTI
GENGSFVNTTVSTFNWEEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAVAADSREFSGVGG
VGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEDFHKSESEDSMRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMVPALPANGKMHSTVDCNGVVSLVG
GPPALTSPTGQLLPEGTTTETELRKRRTSSYHVSMDFLSEPSARQRAMSIASILTNTMEE
LEESRQKCPPCWYKFANTCLIWDCCTPWLRVKHIVNLIVMDPFVDLAITICIVLNTLFMA
MEHYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDGFIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQA
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYV
KRKAREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTVIEIGKDLNYLKDGNGTTSG
VGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNA
SSSSEGSTVDIGLPQEGEQPEIEPEEALEPEACFTEGCVRKFKCCQVSTEDGKGKIWWNL
RKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM
LLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTNDERFDI
SQINNYSQCEDLINNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRKV
LDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDNQSD
EMQDNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVILSIVGMFLADLIEK
YFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPYKDH
PGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEM
FYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDI
LFAFTKRVLGESGEMDTLRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAFR
RYLLKQKIKKVSCMFNQDKDKDEDDLPIKEDMIIDKLNENSTPEKTDMTPSTTSPPSYDS
VTKPDKEKYEKDKSEKEDKGKDVRESKK

NT seq 6027 nt +upstreamnt +downstreamnt
atggcacaatcagtgctggtaccaccaggacctgacagcttccactatttcacgagagag
tcacttgcagctatcgaacaacgtattgctgaagaaaaagctaagaagtctaaacaagaa
cgtaaagatgacgatgatgaaaatggaccaaaaccaaacagtgacctggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtctgagcccttggaggat
ctggacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatc
ttccgattcagtgccacctctgctgtgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgactatgagtaaccctccggaatggacaaagaatgtagaatac
acattcacgggaatttatacctttgaatcacttgtaaaaattcttgcaaggggcttctgt
ttagaagattttacttttcttcgagacccatggaattggctagatttcactgtcattacg
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctcattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgcttgcag
tggcctccagacaattctactttggaaataaatgttatttcctactttaatagcacaata
ggcgaaaatggatcatttgttaatacaacagtgagcacatttaattgggaggagtacatc
gaggatagaagtcatttttactttttggaaggacagaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtaaaagctggtagaaacccc
aactatggctacacgagctttgacacattcagctgggcgtttttgtcactctttcgactg
atgactcaggacttttgggagaatctttatcagctgacgctacgtgctgctggcaaaaca
tacatgatattttttgttctggtaattttcctgggttctttctatctgattaacttgatc
ctggctgttgttgctatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaggaggcagaatttcagcagatgcttgaacagttgaaaaaacaacaagaagaagct
caggcagcagcagcagctgcagtagcagctgattcaagagagttcagcggagtaggtggg
gtaggaggattctctgaaagttcttctgaagcatcgaagttgagttcaaagagtgctaaa
gagagaaggaacagaaggaagaagagaaaacagaaggaacagtctgaaggagaggagaaa
gatgaggaagattttcacaaatctgaatcagaagatagcatgagaaggaaaggtttccga
ttctccattgaagggaacaggctgacatatgaaaagaggttctcttctccacatcagtct
ttgctgagcattcgtggctccctgttttccccaaggcgcagcagcagaacgagtcttttc
agcttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgaacat
agcacttttgaagacaatgagagtagaagaggttctctctttgttccacatagacatggt
gaacggcgcaacagtaacattagtcaggccagtaggtcatccagaatggtaccagcgctt
ccagcaaatgggaagatgcacagcactgtagattgcaatggggtggtttctttagttggt
ggacctccggctctcacgtcacctactggacagcttctcccagagggtaccacaacagaa
acagaattaagaaagagacggacaagttcttaccacgtttctatggatttcctgtcagag
cccagtgcaagacaaagagcaatgagtatagccagcatactcacaaacacaatggaagaa
cttgaagaatccaggcagaaatgcccaccatgctggtataaatttgctaacacatgcttg
atctgggattgctgcactccatggttaagagtaaaacatattgtaaatttgattgtgatg
gatccatttgtcgatcttgctattactatctgcattgttttaaacacattgtttatggcc
atggagcattatccaatgacggaacagtttagtcacgtgctttcagtaggaaatctggtc
tttactggcatcttcacagcagaaatgtttctcaagatagttgccatggatccttattat
tatttccaagaaggctggaatatttttgatggttttattgtgagccttagtttaatggag
cttggtcttgcaaatgtggaaggattatctgttctcagatcattcagattgcttcgagtt
ttcaagttggcaaaatcttggccaacactgaatatgctgataaagattattggtaattca
gtgggggctttgggaaatttgacattggtgctggccatcattgtcttcattttcgctgtg
gttggtatgcagctgtttggtaaaagctacaaggaatgtgtctgcaagatctccaatgac
tgtgaacttccacgctggcacatgcatgacttcttccactctttcttgattgtattccga
gtactatgtggagaatggatagagactatgtgggattgtatggaggttgcggggcaagcc
atgtgccttattgttttcatgatggtcatggtgattggaaacctagtggtactcaatctc
tttctggctttactgctgagctcatttagttcagacaaccttgcggctacagatgatgat
aatgaaatgaacaatctccaaattgcagtggcaaggattcagaagggaatagattatgtg
aaaagaaaagcacgtgaattcatccaaaaagcctttgttagaaagcagaaagctttagat
gaaatcaagcctcttgaagatctaaacaacaaaaaagacagctgcatttccaaccatact
gtcatagaaataggtaaagaccttaactatcttaaagatgggaatggaactaccagtggc
gtaggcagcagcgtggaaaaatatgtcgtcgatgaaagtgattatatgtcattcataaat
aatccaagcctcactgtgacagtaccaattgctgttggggaatcagattttgaaaattta
aatacggaagagtttagcagcgagtcagatctagaggaaagcaaagagaagctaaatgca
tccagctcatctgaaggtagtacagttgatattggacttcctcaagaaggagaacagcca
gagatagaacctgaagaagctcttgaaccagaagcctgttttacagaaggctgtgtacgg
aagttcaagtgctgtcaagtcagcacagaagatgggaaaggaaaaatatggtggaatctt
aggaaaacctgctacaagatagttgaacacaactggtttgagaccttcattgtcttcatg
attctcctcagcagtggtgctctggcttttgaagacatatacattgaacagcgcaagact
atcaagaccatgctggagtatgctgataaggtcttcacttacatcttcattctggaaatg
cttctaaaatgggtggcttatggttttcaaacctatttcactaatgcctggtgctggctg
gacttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactca
gaacttggtgcgattaaatcccttaggacattaagagctttgagacctctaagagccttg
tcacgatttgaagggatgagggtcgttgtgaatgccctcttaggagcaattccatccatt
atgaatgtgcttcttgtttgtcttatattctggctaatcttcagcatcatgggagtaaat
ctgtttgctggcaaattctactattgtgttaataccacaaatgatgagaggtttgatatc
agccaaatcaacaattatagccaatgtgaggacctcataaacaacaatgaaactgccaga
tggaaaaatgttaaagtaaactttgataatgtaggacttggctatctttctctgcttcaa
gtagccacatttaaaggatggatggatataatgtatgcagctgtggattctcgaaaggta
ttggatcagcctaagtatgaggacaacctgtacatgtatctttactttgtcatcttcatc
atctttggatcattctttaccctgaaccttttcattggtgtcatcatagataatttcaac
cagcaaaaaaagaagtttggaggccaagacatctttatgacagaagaacagaagaaatat
tacaatgcaatgaaaaagcttggttcaaagaagccacaaaaacctatacctaggccagcg
aacaaattccaaggcatggtctttgattttgtgacaaaacaagtatttgacatcagcatc
atgattcttatctgccttaacatggtcaccatgatggtagaaacagacaaccagagtgat
gagatgcaagataatttatggtggattaaccttgtgttcattgtccttttcactggagaa
tgtattctgaaactgatttcacttcgttattactacttcaccataggctggaacattttt
gattttgtagttgtcattctttccatagtaggtatgtttctagctgacctgattgaaaaa
tattttgtgtcccccaccttgttcagagttatccgactcgccagaataggtcgaatcctg
cgtctcattaagggtgctaaaggaatccgcactctgctttttgctttgatgatgtctctt
cctgctttgtttaacataggtctcctgcttttcctggtcatgtttatctatgctatattt
ggaatgtccaactttgcctacgttaagagggaagttgggattgatgacatgttcaacttt
gaaacttttggcaacagtatgatctgcctatttcaaattaccacatcagctggttgggat
ggtttgttagcaccaattctgaacagtggagaaccagactgtgacccttacaaagatcac
ccaggaagctctgttaaaggagactgtggtaacccttcagttgggattttcttttttgtc
agttatattatcatctcatttctagttgtagtaaacatgtatattgctgttattttggag
aacttcagtgttgctacagaagaaagtgccgagcccttgagtgaggatgactttgagatg
ttctatgaggtttgggaaaagtttgatccagatgccacccagttcatagagttcagtaaa
ctatctgattttgcagcttcactggatcctcctcttcttatagcaaaaccaaacaaagtt
cagcttattgcaatggatcttcccatggtaagtggtgacagaattcactgccttgacatc
ttgtttgcttttacaaagcgtgttttgggggaaagtggagaaatggatacacttcgaata
caaatggaagatcggtttatggcagcaaatccttctaaagtctcctatgaaccgattaca
accacattaaaacgaaaacaagaggaagtatctgctgtcattattcagcgagctttcaga
cgttaccttttaaagcaaaaaattaaaaaagtttcatgtatgtttaaccaagataaagat
aaagatgaggatgacctgcctatcaaagaagatatgattattgataagctaaatgagaac
tccactccagaaaaaacagatatgaccccttccacaacctctccaccttcctatgatagc
gtaacaaagccagacaaagagaaatatgaaaaagacaaatcagaaaaagaagacaaaggt
aaagacgtcagggaaagtaaaaagtaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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