KEGG   Chelonia mydas (green sea turtle): 102946010
Entry
102946010         CDS       T02989                                 
Symbol
TENT4B
Name
(RefSeq) terminal nucleotidyltransferase 4B isoform X1
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102946010 (TENT4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102946010 (TENT4B)
   03016 Transfer RNA biogenesis [BR:cmy03016]
    102946010 (TENT4B)
Enzymes [BR:cmy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     102946010 (TENT4B)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     102946010 (TENT4B)
Transfer RNA biogenesis [BR:cmy03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    102946010 (TENT4B)
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta TUTase PAP_NTPase
Other DBs
NCBI-GeneID: 102946010
NCBI-ProteinID: XP_007059717
Position
12:complement(16002190..16053430)
AA seq 672 aa
MDPRIAWFQPEQLGPSNRLWMQIWETTQGVRNLYFQQQRLQSAPAGVGPASPPGMYRVPR
IDPQPDFLPLENANNQHNHSRHQAPPPPGPTAWARPARGAPPAASASAAGNKRKRDNKAS
TFGLNYTILLGPPEQSGAPAPGDGPAASDQAQPLFTDTPWKGRNYSPGVVGLHEEIIDFF
KYMSPRPEEERMRMEVVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDIDLVVFGKWET
LPLWTLEEALRKHNVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVKAAQLIR
DFIKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIHSAN
YGVLLIEFFELYGRHFNYLKTGIRIKNGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGN
DVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTQEVASYREWI
SKHWGMQSRTESSCNGNGVTLIVDTQQLDKCNNNLSEVNEALGKSRSKTSETLSKHSSNS
SSGPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCHQSTTNRVGSQEIALESSQSSGKRQSS
QTANTSNSTNKSQHGSARLFRSSSSKGFQGPTNANHGTSVTNKQHQGSKSHQCFHVKKRK
HKRDVALSDLCR
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggatccccggatcgcctggttccagccagagcagctcggcccctcgaaccgcctgtgg
atgcagatctgggagaccacgcagggggtccgcaacctgtacttccagcagcagcggctg
cagagcgctcccgccggggtgggcccggcctccccgcccggcatgtaccgcgtcccccgg
atcgacccccagcccgacttcctgccgctcgagaacgccaacaaccagcacaaccacagc
cgccaccaggccccgccgcccccggggcccaccgcctgggcccggcctgcacggggggcg
ccgcccgccgcctcggcctcggccgccggcaacaagaggaaacgtgacaacaaggccagc
accttcgggctcaactacaccatcctcctggggccccccgagcagagcggggcccccgcc
ccgggggacgggccggccgccagcgaccaggcccagccgctcttcaccgacaccccttgg
aaggggaggaactacagcccgggagtcgtgggtcttcatgaagaaatcattgatttcttc
aagtacatgtctcccagaccggaagaagaaagaatgcgaatggaagtggtgaacagaata
gaaaacgttattaaggagctctggccaaatgcagatgtgcagatatttggaagttttaaa
actggtttatatctacctactagtgatattgacttagttgtgtttggaaaatgggagact
ttgcctctgtggaccctggaagaggctcttagaaagcacaatgtagcagatgaagattca
gtaaaggttctagacaaagcaactgtacctattattaaactgacagattccttcactgaa
gtaaaagtcgatatcagctttaatgtacagaatggggttaaagcagcccaactcatcaga
gattttatcaagaaatatcctgtattaccatatctagttttagtattaaaacagttcctg
ttacagagggaccttaatgaagtattcacaggtggaattggttcttatagtcttttttta
atggctgtcagcttcctccagctacatcccagggaagatgcctgtatccacagtgccaac
tatggtgtccttttaatagaattttttgaattatatggacgtcacttcaattacctgaag
actggaatccgaataaagaatggtggttcatatgtggctaaagatgaagtgcaaaagagt
atgctggatggctatagaccatcaatgctatatattgaagatccactacagccaggtaat
gatgttgggaggagttcatatggtgccatgcaagtgaaacaggcctttgattatgcatat
gttgttttgagccatgctgtatcaccaatagctaaatattatcccaacaatgaaactgaa
agtatattaggtagaataattagagtaacgcaagaagtggcctcatacagagagtggata
tcaaagcattggggaatgcagagtcggactgagtcttcatgcaatggtaatggagtaact
ttgatagtagatactcagcagctggacaagtgtaacaataatctctctgaagtgaatgaa
gcactgggaaaatctagaagtaaaacttcagaaacactcagtaaacattcttcaaactct
tcatcaggtccattgtcttcctcatcttctactttgtccagctctagtgatgtagattct
gacggaacaccatgcaaaacctctaaacagttgagttgccatcaatctactacaaacaga
gtggggtcacaagaaatagcactggaatcctcccagtccagtgggaaaaggcaaagcagc
caaacagctaatacatccaacagcacaaacaaatcgcagcatggatcagcaaggttattt
cgctcttcctccagcaaaggcttccagggtccaacaaacgcaaaccacggtacctcagtg
acaaacaaacagcatcaaggcagtaaatcacatcagtgtttccatgtcaaaaagaggaaa
cacaagagagacgtggccctttctgacctttgtagatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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