KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBA3200
Entry
CNBA3200          CDS       T01040                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 fusion protein
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03010  Ribosome
cnb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CNBA3200
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CNBA3200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cnb03011]
    CNBA3200
   04121 Ubiquitin system [BR:cnb04121]
    CNBA3200
Ribosome [BR:cnb03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    CNBA3200
  Archaea
    CNBA3200
Ubiquitin system [BR:cnb04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   CNBA3200
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Plexin_RBD DUF2604 Dsc3_N Sde2_N_Ubi OTU1_UBXL
Other DBs
NCBI-GeneID: 4933577
NCBI-ProteinID: XP_778320
Position
1:860342..861130
AA seq 129 aa
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKRKCGHSSQ
IRPKKALKK
NT seq 390 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaagactcttaccggaaagaccatcaccctcgaggtcgagtcctcc
gacaccatcgacaatgtcaagtccaagatccaggacaaggagggtatcccccctgaccag
cagcgattgatcttcgccggaaagcagcttgaggatggcaggaccctttctgactacaac
atccagaaggagtctaccctccatcttgtcctccgtctccgaggtggtatcatcgagccc
tctctcaaggctcttgcttctaagtacaactgtgagaagcaaatctgccgaaagtgctac
gcccgtctccctccccgtgccaccaactgccgaaagaggaagtgtggccactcttctcag
atccgacccaagaaggccctcaagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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