KEGG T01040: CNBA7300

Cryptococcus neoformans var. neoformans B-3501A: CNBA7300

Entry

CNBA7300          CDS       T01040

Name

(RefSeq) hypothetical protein

K08735

DNA mismatch repair protein MSH2

Organism

cnb Cryptococcus neoformans var. neoformans B-3501A

Pathway

cnb03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:cnb00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CNBA7300
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBA7300
DNA repair and recombination proteins [BR:cnb03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CNBA7300

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_IV MutS_II MutS_I

Other DBs

NCBI-GeneID:

4933996

NCBI-ProteinID:

XP_777609

Position

1:complement(2040878..2044775)

AA seq 965 aa
MPMYGNESTSAPKPLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFI
ANEVYRTTNVLKYLGSGSKPSSSSGQYARGLPSVTISMALTKAFLREALTTKQMRVEIYA
PTGGVAPGSRKDHSKWEISKTASPGNLSQVEDLLFSDRDLTANAVSMAIRVVVKDGINTV
GVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVEWCG
VIVTDRKSSEFQTKNVEQDLNRLLHESHAGAALPEFDLKIAMSALSALINYLSLLSDLSL
HGQLRLYRHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNRCKTSQGTRLLGR
WLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDV
VRVYQAVQLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIEKLGNYSSMVEDTIDLD
ELANHNYVILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLENHQVYKY
SFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEV
VSIASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPC
LEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEAR
LPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFG
LAWAISEYIAETIHCFCLFATHFHELTSLSEKNSHVKNLHVEALVKDKDGEGGAKERDIT
LLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDDQTRAPSSKFSKTEID
AGTDIVKEFLDTWKSRVSAAGRGGGADAEMAMSEDEMVQLLKDTAEEFKDRLEGNEWVKS
LMSTF

NT seq 2898 nt +upstreamnt +downstreamnt
atgcccatgtatgggaacgaatccacctcggcgcccaagccgctcttcgatatggacaag
gacagcgaggaaaaatttgtgcgatttgtggagcgtatgccgactaaattggacggcatg
atcaggctgttcgatcgtggggactactactcggctcacggcgcggacgccatcttcatt
gccaacgaagtctacagaaccacaaatgtcctcaaataccttggttcaggttctaaaccc
tcttcctcttctggacaatatgctcgaggattaccttctgtcaccatatccatggctttg
accaaagctttcctccgggaggcccttacaaccaagcagatgcgtgtcgaaatctacgcc
cccacgggaggagtcgctcctggaagccgaaaggatcattccaaatgggagatctcaaag
acagcttcgcccggcaatctgagccaagtagaagacctgctattcagtgacagagatctg
acagcgaatgcggtctcaatggccatcagggtggtggtcaaagatgggataaacactgtc
ggtgtgggtttcgtagatgtacaagaaaaggtggtaggagtgtctgaattcgttgatgat
gagaacttttcgaacaccgagtcgctattgatccaacttggtgtaaaggaatgtatattg
caagcagatgagaagcgtccagagctggccaaattaaggatgttggtggagtggtgtggt
gtcatcgtcaccgatcgcaaatcgagcgagttccaaaccaaaaatgttgaacaagacctt
aatcggttgttgcacgagtctcatgctggtgccgctttaccggagtttgacctcaaaatc
gccatgtcagctctatcagcacttatcaattatctctcacttctatccgacctctccctc
catggtcaactccgattatatcgtcatgatctttctcagtacatgaagcttgacgcgtcc
gccctcaaggctttgaacctgatgccaaatcctcaagagctgggtggtaacaagaatatg
agcatatatgggttgttaaacagatgcaagactagtcaagggacaaggttgttgggaagg
tggttgaaacagccactggtgaatcgccatgagattattcagagacagactatggttgag
gttttcgttgaggattctgtcaatcgccaatctattcaaacaaagtacctcaagcagatg
cctgactttcacagaatctcgaaaaagttccacaaacgagtggctggattggaagacgtt
gtcagggtgtaccaagctgtgcagctgctgcctggtttgcaggaaattctggaaaatgcc
gacaccccagaaccaggagccagggatcttattgaggaaatttggctcaagcctttacgc
gaacatattgaaaagcttggaaattattcttccatggtagaagacaccatcgatcttgac
gaacttgctaatcacaactatgtgatacttcctactatcgatgaagatcttcagagatac
agagaagagttgttaaacgtgcgagatcagcttgatgatgaacacaggcgagttggaagt
gatctgggtctggatatcgacaagaagcttcatttggagaatcatcaagtttacaagtac
tccttcaggattactaaggcggaggctagcctcattcgtaacaagaaggaatatattgac
ctcgctacccaaaaatctggtaccatattcaccactaaaaccctcaaggcgctgagcgag
gagtacttcagactgcaggagttgtacgagaagcagcaaaggcaccttgtcaaggaggtc
gtctcgatcgcttcctcgtacacaccggttttggaaatgctggataacttgattgcggct
gtcgatgtcattgtcagtatggctcacgtctcttctgaggctcccattccttatgttaaa
cccatcttgactgaaaaaggtaccggtgacgtcgttgttctaggcgcccgtcatccttgt
cttgaagtccaagacgatattgtctttatccctaatgaccatgaaatgcgcaagggtgat
tccgagtttatcatccttaccggaccgaacatgggtggtaaatcgacgtacatccgacag
attggtgtcatcgcccttatggctcaggttggatgctttgtgcccgccacagaagctcgg
ctacccatctttgactgtatccttgcgagggttggtgctggggacaaccaactgaaagga
gtcagtacattcatggccgagatgttggagacggcgaccatcttgagatctgctaccaaa
gactctctgatcatcatcgatgagcttggtcgaggtacatctacatacgatggttttggt
cttgcttgggcaatatcagaatacattgccgaaacgattcactgcttctgtctcttcgcc
acccatttccacgagcttaccagcctttctgaaaagaattctcacgtgaagaacttgcac
gttgaagcccttgtcaaggacaaagatggagaagggggtgcgaaggaaagggacattacg
ttgctgtaccaagtcaaagaaggtatctgtgatcaaagtttcggtatccatgtggccgag
ttggcaaacttccctgagagtgtcgtcaagctcgccaagcgtaaagcggaagagttggaa
gattttggagacgaccaaacccgagccccatcatccaagttttcaaagacggaaatcgat
gctggtacagacatcgtcaaagagttcctcgacacttggaaatctcgcgtctctgccgct
ggaaggggaggaggggcggatgctgagatggccatgagtgaagatgagatggttcagctg
ttgaaggataccgcggaagaattcaaggaccgattggaagggaatgagtgggtgaagagc
ttgatgagcacattctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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