KEGG T01040: CNBF4440

Cryptococcus neoformans var. neoformans B-3501A: CNBF4440

Entry

CNBF4440          CDS       T01040

Name

(RefSeq) hypothetical protein

K13100

pre-mRNA-splicing factor CWC22

Organism

cnb Cryptococcus neoformans var. neoformans B-3501A

Brite

KEGG Orthology (KO) [BR:cnb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnb03041]
    CNBF4440
Spliceosome [BR:cnb03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    CNBF4440
Complex C
   U4/U6.U5 tri-SnRNP related factors
    CNBF4440

SSDB

Motif

Pfam:

MA3 MIF4G DUF6830 POLQ_helical

Other DBs

NCBI-GeneID:

4936996

NCBI-ProteinID:

XP_774765

UniProt:

P0CM97

Position

6:complement(1316734..1319485)

AA seq 831 aa
MPRSLSRSVSPRPRSPSLSPPRPDSRSSRGRSLTPDDIPAYKRKRSPSPNPRDRPASPPT
RRRRSQSPYRNSNRAEIDRPNVKDIDPNRRRARENALLEKQINMALADDGDADGTVATTK
KSADEIARAEFAKLLGSRSGGAYIPPAKLRAMQAEAAKDKTSAEYQRISWDALKKSINGL
INKVNISNIKHIVPELFGENLIRGRGLFARSVMRAQASSLPFTPVFAALVAIINTKLPQV
GELVLIRLISQFRRAYKRNDKTVCHATSTFIAHLCNQYVAHEIVALQILLLCLDRPTDDS
IEVAVGFMREVGQFLSENSPKANNTVFERFRAVLHEGQISKRCQYMIEVLFQVRKDKYKD
NPAVPEGLDLVEEEEQITHRVTLDDELQVQESLNLFKADPNFVQNEERYNAIKREILGDS
DDESGTESGSEYSESEDDEDEDVAPEKAGIQDMTETNLINLRRTIYLTIMNSLNFEEAVH
KLMKVNIPEGREIELCNMVIECCSQERTYSNFYGLIGERFCKLHRIWTDAFQEAFQKYYD
TIHRYETNKLRNIGRFFGHLLASDGISWAVLHVVHMNEEETTSSSRIFVKIVLQEMVEEM
GINRVAERFRIPDLKPAFAGMFPMDNPKNARFSINYFTSIGMGKVTEDMREYLQNAPKLL
AAQQAALAAAESSDSDTDSSSDISSSSDSDSDTDSDASSYSRRSRRRRYSSDSRSPPPQR
RRYSSDSRSPSPPPRRRQYSDEPRSPSPPPRRRRYSDDSRSPSPPPRRRYSGDSRSPSPP
PRRRYADDSRSPSPPPHRRRYSDDSRSPSPPPRRRRYSDNSRSPSPPPRRR

NT seq 2496 nt +upstreamnt +downstreamnt
atgccccgctctctttctcgctctgtctctccccgcccccgctctccgtccctctcgccc
cctcgcccagacagccgctcttcacgtggcaggagcttgactccagatgatatcccggct
tacaagcgaaagaggtccccatctcccaatccacgagatcgtcctgcatcccctcctact
cgtcgacgacgctctcagtctccgtatcgcaattctaaccgagcagaaatcgacaggccc
aacgtcaaggatattgaccctaaccgccgacgtgctcgagagaatgctcttttggaaaaa
caaataaacatggctctggcggacgatggcgatgcggatgggacggtcgcaacgactaaa
aaatcggcagatgagattgctagggcggaatttgcaaagctgcttggatcaaggagtggt
ggagcgtacatccctccggcaaagttgagggctatgcaagcagaggctgccaaggacaag
acgagtgcagagtatcagaggataagctgggatgcgttgaagaagagtatcaatggtttg
atcaacaaggtcaacatctcaaacatcaagcacattgtccccgagctgtttggcgagaac
ctcattcggggtaggggtcttttcgctaggtctgtcatgcgtgcacaagcttcatcgttg
ccgttcactccggtctttgcggctttggttgctatcatcaacaccaaattgccccaagtt
ggcgaactggtattgattcgattgatcagtcaattcagacgagcttacaaaagaaacgat
aagactgtttgccacgccacttccaccttcatcgctcatctttgtaaccaatatgtcgct
cacgaaatcgttgccctccaaatactccttttgtgcctcgatcgtcccactgacgactct
atcgaagttgccgtcgggttcatgcgtgaagtcggtcaattcctttccgaaaactctccc
aaagcaaacaataccgtctttgaacgatttcgagccgttttgcacgaaggccagattagc
aagaggtgtcaatacatgatagaagtcttgtttcaagtcaggaaggacaagtataaggat
aaccccgccgttcctgagggtttggacttggtcgaggaggaggagcaaatcacccatagg
gtgactttggatgatgaattgcaggtgcaagagagtttgaacttgttcaaggccgatcct
aactttgtccaaaacgaagaacgttataatgcaattaagcgtgagattctgggtgattct
gatgatgagtctggtaccgaatcaggcagtgaatattccgaatctgaagacgatgaagat
gaggatgttgccccagaaaaggctggaattcaggatatgacggaaacaaacttgatcaat
ctgagaaggacgatttatttgaccatcatgaactcgctcaattttgaagaagctgtacac
aagctcatgaaagtgaacatacccgaaggccgagagattgagctttgtaatatggttatc
gaatgttgttcccaagaacgaacatattccaacttttacggtctcatcggcgagagattc
tgcaagcttcaccgaatttggaccgatgcattccaagaagcgtttcaaaagtattacgat
accattcatcgatatgaaaccaacaagctgcgtaacattggccgtttctttggccacctt
ctcgcatccgacggtatttcatgggcagttcttcacgtcgttcatatgaacgaggaagag
accacctcttccagccgtatctttgttaagatcgtgcttcaagaaatggtcgaagagatg
ggtatcaaccgtgttgccgaacgattccgcattcccgacctcaaacccgcgtttgccggc
atgttccccatggacaaccccaagaatgcccgattctctatcaactactttacctctatc
ggcatgggcaaggttaccgaagatatgagagagtacctccaaaacgctcccaagcttttg
gcagctcagcaggctgcattggccgctgcagaatcgtcagattccgatacggattcgagc
tcggatatatcatcgtcttctgacagcgatagcgacactgactcggacgcgagtagctat
tcgcgtcgttcgaggagaaggaggtatagttctgactcacgttcgccacctcctcaaagg
aggaggtatagttcagactctcgctcgccttcgccccctccccgtcgaaggcagtactct
gatgaaccccgttccccttctccccctccccgccgaaggagatattctgatgactctcgt
tccccttctccgcctcctcgaaggaggtactcgggcgactcccgttccccttctccgcct
cctcgaaggaggtacgcggacgactctcgttccccatcgcccccgccccatcgaaggaga
tattctgatgactctcgttccccctcgccacctcctcgtcgaaggaggtactcggacaac
tctcgttccccatctccacctccccgacgacgatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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