KEGG T01564: CNE

Cupriavidus necator N-1: CNE_1c00030

Entry

CNE_1c00030       CDS       T01564

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

cnc Cupriavidus necator N-1

Brite

KEGG Orthology (KO) [BR:cnc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnc03032]
    CNE_1c00030 (gyrB)
   03400 DNA repair and recombination proteins [BR:cnc03400]
    CNE_1c00030 (gyrB)
Enzymes [BR:cnc01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CNE_1c00030 (gyrB)
DNA replication proteins [BR:cnc03032]
Prokaryotic type
  DNA Topoisomerases
   CNE_1c00030 (gyrB)
DNA repair and recombination proteins [BR:cnc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CNE_1c00030 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3

Other DBs

NCBI-ProteinID:

AEI75373

UniProt:

G0ERU5

Position

1:3557..6082

AA seq 841 aa
MTEQQNPQQENTYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCTEIQVTIHSDNSISIVDNGRGIPPLVKFDDKHEPKRSAAEIAMTELHAGGKFNQNS
YKVSGGLHGVGVSCVNALSKWLRLTVRRDGQVHLIEFAKGDVQNRIVETVTGPDGQPVEV
SPMKIIGATDKRGTEVHFLADEEIFTNVEFHYEILSKRIRELSFLNNGVHIKLVDQRTGK
EEDFAFSGGVKGFVEYINRSKSVLHPTIFYANTEKDGIAVEVAMQWNDGYNEQVLCFTNN
IPQRDGGTHLTGLRAAMTRVINKYIEENEVAKKAKVETTGDDMREGLSCVLSVKVPEPKF
SSQTKDKLVSSEVRLPVEELVGKALSDFLLETPGDAKIICGKIVDAARAREAARKAREMT
RRKGLMDGMGLPGKLADCQEKDPALSELFLVEGDSAGGSAKQGRDRKFQAILPLKGKILN
VERARFDKMLSSQEVLTLITALGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLT
FFYRQMPDIIERGYVYIAQPPLYKIKHGKEERYIKDDVELNAYLLKLAMEKAVLVRPDGT
EINGDALTELARQYQLTEGVISRLSRIVDTDALRAIADGVALDLDSAAAAEASAVALKAK
LAEMHAKTLIGAAVNDDGTADVYAQFDEKTDKHRLMIARRHHGNVRLSHLDADFVHGADY
AALSNAAKTFQGLTPEGTKVQRGEGEKLRDQTVNDFHGAMQWLLAEAERGVSRQRYKGLG
EMNPEQLFETTLDVTQRRLLKVQIEDAIAADQIFTTLMGDEVEPRRNFIESNALVARNID
V

NT seq 2526 nt +upstreamnt +downstreamnt
atgaccgaacagcagaacccgcagcaggaaaacacctacggagcctcttcgatccagatt
ctggaaggcctggaggcggtacgcaagcgcccgggcatgtatatcggtgatacctccgac
ggcaccggcctgcaccaccttgtcttcgaggtgctggacaactccatcgacgaagcgctg
gccggctactgcaccgagatccaggtcaccatccacagcgacaactcgatctccatcgtc
gacaacggccgcggcatcccgcccctggtcaagttcgacgacaagcacgaacccaagcgc
agcgcggcggaaatcgccatgaccgagctgcacgccggcggcaagttcaaccagaacagc
tacaaggtgtccgggggcctgcacggcgtgggcgtgtcctgcgtgaacgccctgtccaag
tggctgcgcctgaccgtgcgccgcgacggccaggtccacctgatcgaattcgccaagggc
gacgtacagaaccgcatcgtcgagaccgtgaccggccccgacggccagcccgttgaagtc
tcgccgatgaagatcatcggcgccaccgacaagcgcggcaccgaagtgcacttcctggcc
gacgaagaaatcttcaccaacgtcgagttccactacgagatcctctccaagcgcatccgc
gagctctcgttcctgaacaacggcgtgcacatcaagctggtcgaccagcgcaccggcaag
gaggaagactttgccttctccggcggcgtgaagggttttgtcgagtacatcaaccgctcc
aagagcgtgctgcaccccaccatcttctacgccaacaccgaaaaagacggtatcgccgtg
gaagtggccatgcagtggaacgacggctacaacgagcaggtgctctgcttcaccaacaac
atcccgcagcgggatggcggcacccacctgaccggcctgcgcgccgcgatgacccgcgtc
atcaacaagtacatcgaagagaacgaagtcgccaagaaagccaaggtggaaaccaccggc
gacgacatgcgcgaaggcctgtcctgcgtgctctccgtcaaggtgcccgagcccaagttc
agctcgcagaccaaggacaagctggtctcttccgaagtgcgcctgccggtggaagaactc
gtcggcaaggccctgagcgacttcctgctggaaaccccgggcgatgccaagatcatctgc
ggcaagatcgtcgacgccgcccgcgcccgcgaagccgcccgcaaggcccgcgaaatgacg
cgccgcaagggcctgatggacggcatgggcctgcccggcaagctggcagactgccaggaa
aaagaccccgccctgtcagaactcttcctggtggagggcgactccgcaggcggctccgcc
aagcaaggccgcgaccgtaagttccaggccatcctgcccctgaagggcaagatcctgaac
gtagaacgcgcccgcttcgacaagatgctgtccagccaggaagtgctgaccctgatcacc
gcactgggcaccggcatcggcaaggacgactacaacctggacaagctgcgctaccaccgc
atcatcatcatgaccgatgctgatgtggacggctcgcacatccgcaccctgttgctgaca
ttcttctaccgccagatgcccgacatcatcgagcgcggctacgtctatatcgcgcagccg
ccgctgtacaagatcaagcacggcaaggaagagcggtatatcaaggatgatgtcgagctc
aatgcctacctgctgaagctggcgatggagaaggctgtgctggtgcggccggatgggact
gagatcaatggggatgcgctgactgagttggcgcggcagtatcagctgactgagggggtg
atttctcgcctgtcacggattgttgataccgatgccctgcgtgctattgctgatggggtg
gcgctggatctggacagcgcggctgctgctgaggcgtctgctgtggcgttgaaggctaag
ttggctgagatgcatgccaagacgttgattggggcggctgttaatgatgatggcactgct
gatgtctatgcgcagtttgatgagaagacggataagcatcggttgatgattgcgcgtcgt
catcatgggaacgtgcggttgtcgcatctggatgcggacttcgtccatggtgctgactat
gctgctctctccaatgcggccaagactttccaggggctgactccggaaggcaccaaggtg
cagcggggcgaaggcgaaaagctgcgtgatcagactgtcaatgacttccacggggccatg
caatggctgctggctgaggctgagcgtggggtttctcgtcagcggtataaggggctgggg
gagatgaatcctgagcagttgtttgagacgacgctggacgttactcagcgccgactgctg
aaggtgcagattgaggatgctattgcggcggatcagatcttcactacgctgatgggggat
gaggtggagccgcgtaggaactttattgagagtaatgcgctggtggcgaggaatattgac
gtctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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