KEGG   Calditerrivibrio nitroreducens: Calni_1210
Entry
Calni_1210        CDS       T01364                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cni  Calditerrivibrio nitroreducens
Pathway
cni03030  DNA replication
cni03430  Mismatch repair
cni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Calni_1210
   03430 Mismatch repair
    Calni_1210
   03440 Homologous recombination
    Calni_1210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cni03032]
    Calni_1210
   03400 DNA repair and recombination proteins [BR:cni03400]
    Calni_1210
Enzymes [BR:cni01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Calni_1210
DNA replication proteins [BR:cni03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Calni_1210
DNA repair and recombination proteins [BR:cni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Calni_1210
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2 DNA_pol_A_exo1 DNApol_Exo
Other DBs
NCBI-ProteinID: ADR19118
UniProt: E4TIY6
Position
complement(1269082..1269762)
AA seq 226 aa
MFGKLFKKGKTDFYNDPIRNYVVKICETYNKTDFLSRTIFDVEFCVVDTETTGLDINTAK
IINLAAVKIKGFKIIDYYNVFINPGKSIDPESIKWHGITDEMVKDKPFVVEVMPEFVKFI
RKSVIVGHHIKFDVDMISKELMETFGCSLKQKCLDTMFIYTRGIAKKNDHVGLDFLLDLY
KVRCNGRHTALGDAMATAEVFNKMVMQISDRFKTVRDLYELHREQT
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtttggaaaattattcaaaaaaggtaaaacagatttttataatgaccctatccgtaat
tacgttgtgaaaatttgtgaaacatataataaaacagattttcttagtagaactatattt
gatgtggagttttgtgtggtggataccgaaaccacaggtcttgatattaatacggctaaa
attatcaatcttgctgcggtgaagataaaagggtttaagataatagactattacaatgta
tttattaatccaggtaaaagtatagatccagaatcgataaaatggcatggaataactgat
gaaatggtgaaagataaaccttttgtggtggaggtgatgccggaatttgtaaaattcata
cggaaatcagttattgtggggcatcatataaagtttgatgtggatatgatatcaaaagag
cttatggaaacttttggttgttcgctaaaacagaaatgccttgatacgatgtttatatat
accagaggaattgctaagaaaaatgaccatgtggggcttgatttcttgctcgatctttat
aaagtgagatgtaatggcagacacaccgctcttggggatgcaatggctacagcggaggta
ttcaacaagatggttatgcagatttctgatagatttaaaacagtacgggatctttatgaa
ttacatagggagcaaacatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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