KEGG   Capnocytophaga sp. oral taxon 323: AM608_01420
Entry
AM608_01420       CDS       T04076                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
col  Capnocytophaga sp. oral taxon 323
Pathway
col02024  Quorum sensing
col03060  Protein export
col03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:col00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AM608_01420
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AM608_01420
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AM608_01420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:col02044]
    AM608_01420
Enzymes [BR:col01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AM608_01420
Secretion system [BR:col02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AM608_01420
  Eukaryotic Sec-SRP protein
   AM608_01420
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW CbiA AAA_22 nSTAND3 CLP1_P KAP_NTPase APS_kinase 6PF2K AAA_24 AAA_33 ATPase AAA_31 KTI12 ResIII AAA_16 DO-GTPase1 AAA_18 ATP_bind_1 TsaE SLFN-g3_helicase NACHT ArsA_ATPase
Other DBs
NCBI-ProteinID: ALC96408
UniProt: A0A0M4H0P5
Position
complement(314228..315559)
AA seq 443 aa
MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL
GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLSGNPTVILMSGLQGSGKTTFSGKLA
NYLKNKRNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAKE
NHLNVVIVDTAGRLAVDEQMMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLN
FDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVV
SLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK
DLDIKDDAFKHIEAIIHSMTPKERNMPAIIDLNRKKRIAKGSGRDIQEVNQLMKQFEQMS
KMMKMMQGGGGRKMMQMMQGMRG
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagtgataaattagagaaagccctacataacttaaagggacacggt
aagattaccgaaataaacgtagctgaaacactgaaagaagtgcgtcgcgctttgcttgat
gccgacgtgaattataagatagccaaagattttaccaataacgtaaaagaaaaagcctta
ggacaacaagtgctcactaccctacaaccagggcagttaatggtgaagattgtaaaagat
gagctcacccagctaatgggaggtgatgctgctggagtgaacctatcggggaatcctact
gttatattgatgtcggggttacaaggttctggtaagactactttctcagggaaattggct
aactacctcaaaaataaaagaaataaaaaaccattgctcgtagcgtgcgacgtgtatcgt
cctgctgcgatagaccaattacatattgtaggagagcaggtgggggtacctgttttttcg
gataaaggcaataataaccctgtggacattgccaaaaaaggagtgcaatacgccaaagaa
aaccacttgaacgtggtgattgtggataccgcaggtcggttggcagtagacgagcaaatg
atgaccgaaatatcgaatatccacaaagcactgaacccacaagaaaccctttttgtagta
gatgcgatgacggggcaagatgctgtaaacacggctaaagccttcaacgatgtgctgaac
ttcgatggggttatccttaccaaactcgacggggacacccgcggtggggcggctatcact
attaaatcggtagtgaataaacctatcaaattcgtaggtaccggcgagaaaatggacgct
attgatgtgttctatcctgatcgtatggctgaccgtatcctcggtatgggcgacgtggta
tcattagtagaacgcgctcaagagcagtttgacgaagagcaagcgcgcaaattgcaaaag
aaaattgcaaaaaaccaatttgggtttgacgactttcttgaacaaatacagcaaattaag
cgtatgggtagtatgaaagacctccttggtatgcttcccggtgtaggcaaagcagtgaaa
gacctcgatatcaaagacgacgctttcaagcatatcgaagcaattatccattcgatgact
ccaaaagagcgcaatatgcctgctatcatagatttaaaccgcaaaaaacgaattgccaag
ggtagcggtcgcgatattcaagaggtaaaccaactaatgaaacagttcgagcaaatgagc
aagatgatgaaaatgatgcaaggtggcggtggtagaaagatgatgcagatgatgcaggga
atgagaggttag

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