KEGG   Colwellia sp. PAMC 21821: A3Q33_13060
Entry
A3Q33_13060       CDS       T04816                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38,39,40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:colw03016]
    A3Q33_13060 (truA)
Enzymes [BR:colw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     A3Q33_13060 (truA)
Transfer RNA biogenesis [BR:colw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    A3Q33_13060 (truA)
 Prokaryotic type
    A3Q33_13060 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 WVELL
Other DBs
NCBI-ProteinID: ARD45155
Position
3070159..3070941
AA seq 260 aa
MRYALGIEYDGSNYYGWQRQKNVISVQEMVEKALSKIANEPIEVVCAGRTDTGVNATNQV
IHFETEKVRKDVAWTLGVNTNLPKDIAVSWVKEVNDDFHARFSATARRYRYIINNNRLRS
AILSSGISFCHYPLNENLMHQAAQYLVGRHDFTSFRTVHCQSNSPTRTLHYCNVSRQGEF
VIIDIKGNAFLHHMVRNIAGSLMKVGQELKPVSWLKEVLEAKNRCVAGITAPSAGLYFVD
VDYPEAFGIPKRSPGPLFLL
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcgttacgctttaggcatagaatacgatggtagtaactactacggttggcaaagacaa
aagaatgttattagcgttcaagaaatggtagaaaaggctttatcaaaaatagccaatgaa
cccattgaagtcgtctgcgcaggtagaaccgatactggggttaatgcgaccaatcaggtc
atccactttgagaccgaaaaagtccgtaaagatgtcgcttggacattaggggttaatact
aatttgccgaaagatattgcggtatcttgggtgaaagaggttaatgatgactttcatgct
cgctttagtgcaaccgctagacggtatcgttatattattaataataatcgtttacggtca
gcaattttaagctcaggtattagcttttgccattacccacttaatgaaaatttaatgcac
caagcagcacaatatttagtgggtcgacatgactttacttcgtttagaaccgtgcattgt
cagtcaaattctccaactcgtaccttgcattattgtaatgtctcccgccaaggtgagttt
gttattattgatataaaaggcaatgcatttttacaccatatggtgagaaatatagctggt
agcttgatgaaagttggtcaagaactgaaaccggttagttggcttaaagaagtattagag
gcaaaaaatcgttgtgttgcgggtattactgcaccatctgcggggctatattttgttgat
gttgattaccctgaagcgtttggtattccaaagcgtagcccagggccattatttctacta
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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