KEGG   Colwellia sp. MT41: CMT41_02435
Entry
CMT41_02435       CDS       T04159                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
com  Colwellia sp. MT41
Pathway
com03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:com00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CMT41_02435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:com03021]
    CMT41_02435
   03400 DNA repair and recombination proteins [BR:com03400]
    CMT41_02435
Enzymes [BR:com01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CMT41_02435
Transcription machinery [BR:com03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CMT41_02435
DNA repair and recombination proteins [BR:com03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CMT41_02435
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: ALO33698
UniProt: A0A0S2JCG2
Position
562609..563598
AA seq 329 aa
MQGSVTEFLRPRMVGIEHINPRRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAIILEGKNEAVLTLTKSGEGPVTAADIQHDGD
VTITNPEHVICTLTSEGSISMRIKIEMGRGYVPASVRRDAEEEDRAIGRLLVDASFSPVV
RIAYDVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLDAFVELRDIKEVE
QVEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIVDND
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtaaccgaattccttagaccacgtatggttggtatcgaacatatcaac
cctcgtcgcgctaaagtaactttagagccactagaacgtggttttggtcacactttaggt
aatgcgttacgccgcattcttttatcttcaatgccgggttgtgccgtaactgaagttgag
attgatggtgtattacatgagtacagtagtaaagaaggtgttcaagaggacatcatcgaa
atattgttaaatcttaaagggctagcaataatattagaaggcaaaaatgaagccgttcta
acgttaactaagtctggtgaaggccctgtaacggcagctgatattcaacatgatggtgac
gtaactattactaacccagaacatgttatctgcaccttaacaagtgaaggttctatcagc
atgcgcattaaaattgaaatgggtcgtggttacgtacctgcttcagttcgtcgtgatgcc
gaggaagaagatcgtgctattggtcgtttgttggtagatgcctcattcagcccagtagta
agaattgcttatgatgttgagtctgcacgtgttgaacaacgtacagatttagacaaatta
attatagacatggaaaccaatggtacattggatccggaagaagctatccgtcgtgcttca
acaattcttgctgaacagcttgatgcgtttgtagaacttcgtgatattaaagaagtagaa
caagtggaagaaaaaccattgttcgacccaattttgcttcgtcctgttgatgatctagaa
ttaactgttcgttcagctaactgtttaaaagcagaagcaattcaatacattggtgattta
gtacaacgtgctgaagttgagcttcttaaaacgcctaatttaggtaagaagtctctaact
gaaatcaaagacgtgttagcgtctcgtggtttgtctctaggcatgcgcctagaaaactgg
ccgccagaaagcattgttgacaacgactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system