KEGG T01934: Cp267

Corynebacterium pseudotuberculosis 267: Cp267_0239

Entry

Cp267_0239        CDS       T01934

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

cor Corynebacterium pseudotuberculosis 267

Brite

KEGG Orthology (KO) [BR:cor00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cor03032]
    Cp267_0239 (topA)
   03400 DNA repair and recombination proteins [BR:cor03400]
    Cp267_0239 (topA)
Enzymes [BR:cor01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Cp267_0239 (topA)
DNA replication proteins [BR:cor03032]
Prokaryotic type
  DNA Topoisomerases
   Cp267_0239 (topA)
DNA repair and recombination proteins [BR:cor03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Cp267_0239 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4

Other DBs

NCBI-ProteinID:

AFH51147

Position

232932..235868

AA seq 978 aa
MAEKSGPKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPTKYKKEPWAR
LGVNTENGFAPLYVVSPDKKKKVADLKQKLKLVDELLLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAENTRELDANLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFVSAEYWDIEAEFDTGKPDTDGNPHQFTGRLTSVDGKR
VATGRDFNDRGELKGDAVVVNKQRAEALVAELTGAPMNVAKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGNDYVA
EGPRRYDRKVKNSQEAHEAIRPAGEHFATPGELHAQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTIAGKNAEFSATGRTITFPGFLRAYVEITKLSDGRDLADNAERHLPRLAEGDA
LDVNKLEVDEHSTNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVVGLLEKSFSALVDYDFTSSMEDELDDIAAGREDGTEWLTGFYFGDAAASDAT
AESIARHGGLKALVGDNLEHIDARLVNSLELFQDSEGRAVNVRVGRYGPYIERQIGVSAD
GEAEYQRANLSDTTTPDELTLDVAEKLFATPQSGRELGRNPKNDRMIVAKEGRFGPYVTE
LVNDDERAQVEAKAEEIVASERKAEDEQRAAEGKRAKNWETKTAVKQKEKRIAEIVDETL
KPGTASLFKDMEPATVTLEQALQLLSLPREVGVDPSDNAPITAQNGRYGPYLKKGNDSRS
LASEEQIFTITLDEARRIYAEPKRRGRGATSQSVIKELGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPTELTDTRANELLSERRAKEAADGGAEKKATKKAAKKSTKKTTAKKA
VKKPAKTTKRVVKAGRKK

NT seq 2937 nt +upstreamnt +downstreamnt
atggctgaaaagagcggacctaagcgccttgtgatcgtcgagtctgcgacgaaggctaag
aaaattgccccttacttaggcgacgactacatagtcgaggcctccgtggggcacattcgc
gatctcccgcgaggcgctgcagatgttcccactaagtacaaaaaggagccgtgggcccgg
cttggtgtgaacacagagaacggctttgcgcctttgtatgtggttagcccggacaagaag
aagaaagtcgccgatctcaagcaaaagcttaagcttgtcgacgaactcctactggccaca
gaccccgaccgcgagggggaagccatcgcgtggcacttgcttgaggttctcaagcctaaa
gtgcccgtgaagcgcatggtgttcaatgagatcactaaaccggcgattctggctgctgcg
gagaacactcgtgagttggacgcgaacctggtcgacgcgcaggagactcgtcgtatcctc
gatcgtctctatggctatgaggtctcccctgtgctgtggaagaaagtcatgccgcggctt
tctgctggccgcgttcagtcggtggctacccgcgtgatcgttgagcgggagcgtgagcgt
atggcttttgtatccgccgaatactgggacattgaggcggaatttgatacgggtaagcct
gatacggatggcaatccacatcaattcactggccgtcttacctctgtcgacggcaaacgc
gtggctacgggccgcgattttaacgaccgtggcgagcttaaaggcgacgcggtggtcgtg
aataagcaacgcgctgaggcattggttgcggagctgacaggcgctccaatgaacgtggcc
aaggtagaagaaaagccttacactcgtcgcccttatgcgccgtttatgacttcaactttg
cagcaagaagctggacgcaagctgcactttacctctgagcgcacgatgcgtatcgcgcaa
cgtctgtatgaaaacggccatatcacttatatgcgtacggattccacgacgctgtcggag
caaggcttaaaagcggctcgggaacaagctatttcgctttacgggaatgattatgtggca
gaagggccgcgtcgttatgaccgaaaagtaaagaactcacaggaggctcacgaggctatc
cgtccggcaggagagcattttgctacccctggagagctgcacgcccagctcgatgccgag
gaatttaaactctacgagctcatctggcagcgcaccgtagcttcccaaatggcagacgcc
aagggcacatccatgaaggtgaccattgcgggaaagaacgctgagttctccgctactgga
cgaacaatcacgttccccggcttcctgcgcgcatacgtggaaatcaccaagctttccgac
ggccgcgaccttgccgataacgccgagcgtcacctgcctcgtctcgctgagggcgatgcc
ttagacgtgaacaagctggaagtcgacgagcactccaccaatccgcctgcgcgctataca
gaggcgtcgttggtgaaaaaaatggaggagctgggcatcggacgcccatcgacgtatgcc
tcgatcatcaagaccattcaagatcgcggatacgtttactcccgcggtaatgctctggtc
ccaagctgggtagcttttgcggttgtcggtcttttagagaagagcttctctgctcttgtc
gactacgatttcacctcgtcgatggaagatgagctggatgatatcgccgcaggacgagaa
gacggtactgagtggctcactggcttctattttggagatgccgcagcctccgatgccacc
gcagaatctattgcacgtcacggcgggcttaaagcacttgtcggcgacaacctcgagcat
attgacgcgcgtttggttaactccttagaactcttccaagactcagaaggccgtgccgtt
aatgtccgcgttggtcggtacggcccctatatcgaacggcagatcggcgtcagtgctgat
ggcgaggccgagtatcagcgcgccaatctctcagacaccaccaccccagacgagctgacc
ctcgatgtggcggagaaactgtttgcgactccgcaatctggccgtgagctgggcagaaac
cccaagaacgatcgcatgattgtggccaaggaagggcgttttgggccttacgtcaccgag
ttggttaacgatgatgagcgtgctcaggtggaagccaaagcagaggagatcgtcgcctct
gagcgcaaagctgaggatgagcagcgtgctgccgaaggcaaacgcgccaagaactgggag
actaaaactgcagttaagcagaaagaaaagcggatcgctgagatcgtcgatgagactctg
aagccaggcaccgcctcactgttcaaggatatggagccagccacagttacgcttgagcaa
gccctccagcttttgtccttgccacgcgaggtgggagttgatcctagcgataatgcaccc
attaccgcgcagaacggtcgctatggcccctacctgaaaaagggtaatgactcgcgctcg
ctggccagcgaagagcaaatctttactatcactctggatgaggcccgccgaatttacgct
gagcctaaacgacgcggccgaggcgctacctcccagtctgtgattaaagaactaggcgat
aatgacgtctccggcaagccaatgtccgtgcgtgatggacgttttgggccttatgtaacc
gatggcactaccaatgcttctttgcgacgaggcgacgaccccacggagcttacagacact
cgtgctaacgagctactttcggaacgccgtgccaaggaggctgcggacggtggcgcagaa
aagaaagctacgaaaaaagctgcgaagaagtccaccaagaaaaccacggcgaaaaaagcc
gtgaaaaaacctgcaaagactacaaaacgagtggtcaaagctggacgtaagaaatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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