KEGG   Chlorobaculum parvum: Cpar_0704
Entry
Cpar_0704         CDS       T00725                                 
Name
(GenBank) Exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
cpc  Chlorobaculum parvum
Brite
KEGG Orthology (KO) [BR:cpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpc03016]
    Cpar_0704
Enzymes [BR:cpc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Cpar_0704
Transfer RNA biogenesis [BR:cpc03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Cpar_0704
SSDB
Motif
Pfam: RNB RNase_II_C_S1 TetR_C_12 Orthopox_A47
Other DBs
NCBI-ProteinID: ACF11124
UniProt: B3QMH1
Position
754147..755610
AA seq 487 aa
MSKTFTKADIVNIAVDAMLVNGLDPDFSPQAKQQLGSMHGPTEGYGSEILDLTSLLWCSI
DNDDSRDLDQITACEVLDDSSTIIYVAIADVDTLVKKGSPIDGHARTNTTSVYTSAKVFP
MLPLRLSTDLTSLNPDQNRLAIVTIMKIGPDGELINSTVERAWVRNKAQLAYDSVSAWID
GKDELPAAAKAVPGMDEQLRRQDAVAQKLRLQRHAKGSLEFETFQPRAVFEGDRVVGITQ
QEKNRARQLIEEFMIATNACTADFLAEKGVASIRRVVKSPERWKRIVEVAKEYGYSLPGE
PDGKALEKFLAVRHKADPLRFPDLSLTIIKLMGAGEYVVEFPGQKPIGHFGLAERDYTHS
TAPNRRYPDLITLRMTKAFLANCPSPYGVDELEELAVHCTRQEDAARKVERRVRKSEAAL
LLGTMIGQHFDAVVSGHSERGTWVRILTPPAEGRLVRTYGKVSVGKKIKVKLVLADVEQG
FIDFERI
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgagcaaaacattcacgaaagccgatatcgtcaatatcgctgttgatgccatgctggtt
aacgggttggatcccgatttttcgccccaggcaaagcagcagttgggctcgatgcatggg
cccacagaggggtatggttcggagattcttgatttgacctcgttgctctggtgttcgatt
gacaacgacgactcgcgtgatctggaccagattaccgcctgtgaggtgctggatgattcc
tccaccatcatttatgtggctatcgctgacgtcgatacgctggtgaaaaaaggctcgccg
atcgatggccacgcacggacaaataccacctccgtctatacgtcagctaaagtctttccg
atgctgcccttgcgtctttccaccgacctgacctccctcaatcccgatcagaaccggctg
gccatcgtcaccatcatgaaaatcggccctgatggcgagttgatcaactcgacggtcgag
cgcgcatgggtgaggaacaaggctcaactcgcgtatgattctgtctcggcttggatcgat
ggtaaagacgagctgcctgcggctgcaaaggccgttccggggatggatgagcagttgcgc
cgtcaggatgctgtggcgcaaaaattacggttgcaacggcatgcgaaaggttctctggaa
ttcgagacctttcagcctcgcgccgtgttcgaaggggatcgcgttgttggcatcactcag
caggagaagaaccgggcgcgacaactgatcgaggagttcatgattgccaccaacgcctgc
accgccgattttcttgctgaaaagggtgttgcgtcgattcgtcgggtggtaaagtcgcct
gagcgatggaagcgcattgtggaggtggccaaggagtacggctattcgctgcccggtgag
cccgacggaaaagcgctcgaaaaattcctagccgtgaggcacaaggccgatccattgcgt
ttccctgacctttcgctcaccatcatcaagcttatgggagcaggagagtacgtcgtggaa
tttccggggcagaaacccatcgggcactttggccttgccgagcgcgattacactcactcg
acggcaccgaacagacgctatcccgatctgattaccctgagaatgaccaaggcttttctg
gccaactgcccgtccccgtatggcgttgacgagcttgaagagttggcggttcattgcacc
cgccaggaggatgcggcccgcaaggtggagcgtcgcgtacgcaagtctgaagccgcgtta
cttctgggaaccatgatcggtcagcacttcgacgctgttgtctccggtcattcggagcgg
ggcacgtgggtgaggatcctgacgccgccagccgaggggcgtctggtcagaacttacggg
aaagtcagcgttggtaaaaagatcaaggtaaagcttgttttggccgatgtcgaacagggg
ttcattgattttgaaaggatatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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