KEGG   COMPOUND: C00035Help
Entry
C00035                      Compound                               

Name
GDP;
Guanosine 5'-diphosphate;
Guanosine diphosphate
Formula
C10H15N5O11P2
Exact mass
443.0243
Mol weight
443.2005
Structure
Mol fileKCF fileDB searchJmolKegDraw
Remark
Same as: 
Reaction
Pathway
Purine metabolism
Metabolic pathways
RNA transport
Ras signaling pathway
Rap1 signaling pathway
Endocytosis
Module
M00050  
Guanine ribonucleotide biosynthesis IMP => GDP,GTP
Enzyme
1.17.4.1        2.4.1.29        2.4.1.32        2.4.1.33        
2.4.1.36        2.4.1.48        2.4.1.54        2.4.1.65        
2.4.1.69        2.4.1.83        2.4.1.110       2.4.1.132       
2.4.1.142       2.4.1.152       2.4.1.217       2.4.1.246       
2.4.1.251       2.4.1.252       2.4.1.269       2.4.1.270       
2.4.1.308       2.4.1.-         2.7.1.40        2.7.1.48        
2.7.1.81        2.7.1.156       2.7.2.10        2.7.4.6         
2.7.4.8         2.7.7.8         2.7.7.22        2.7.7.69        
2.7.7.78        3.1.7.2         3.2.1.42        3.6.1.5         
3.6.1.6         3.6.1.42        3.6.5.1         3.6.5.2         
3.6.5.3         3.6.5.4         3.6.5.5         3.6.5.6         
4.1.1.32        6.2.1.4         6.2.1.10        6.3.2.31        
6.3.2.34        6.3.4.4
 » show all
Brite
Compounds with biological roles [BR:br08001]
 Nucleic acids
  Nucleotides
   Ribonucleotides
    C00035  GDP
BRITE hierarchy
Other DBs
CAS: 
146-91-8
PubChem: 
ChEBI: 
PDB-CCD: 
3DMET: 
NIKKAJI: 
KCF data Show

ATOM        28
            1   N4y N    29.0166  -14.4798
            2   C8y C    30.0765  -15.2194
            3   C1y C    27.7235  -14.8990
            4   C8x C    29.4941  -13.0820
            5   C8y C    31.3170  -14.3109
            6   N5x N    30.2163  -16.6406
            7   O2x O    26.5879  -14.0431
            8   C1y C    27.2927  -16.1513
            9   N5x N    30.9443  -13.0878
            10  C8y C    32.5692  -14.8643
            11  C8y C    31.5385  -17.2288
            12  C1y C    25.4813  -14.8409
            13  C1y C    25.9123  -16.1513
            14  O1a O    28.1022  -17.2869
            15  N4x N    32.7324  -16.3551
            16  O5x O    33.6816  -14.0372
            17  N1a N    31.6898  -18.6150
            18  C1b C    24.1534  -14.4099
            19  O1a O    25.4639  -17.4734
            20  O2b O    23.1167  -15.3360
            21  P1b P    21.7248  -15.3360
            22  O2c O    20.3329  -15.3360
            23  O1c O    21.7190  -16.7338
            24  O1c O    21.7190  -13.9439
            25  P1b P    18.9408  -15.3301
            26  O1c O    18.9992  -16.7279
            27  O1c O    17.5430  -15.3301
            28  O1c O    18.9992  -13.9382
BOND        30
            1     1   2 1
            2     3   1 1 #Up
            3     1   4 1
            4     2   5 2
            5     2   6 1
            6     3   7 1
            7     3   8 1
            8     4   9 2
            9     5  10 1
            10    6  11 2
            11    7  12 1
            12    8  13 1
            13    8  14 1 #Down
            14   10  15 1
            15   10  16 2
            16   11  17 1
            17   12  18 1 #Up
            18   13  19 1 #Down
            19   18  20 1
            20   20  21 1
            21   21  22 1
            22   21  23 1
            23   21  24 2
            24   22  25 1
            25   25  26 1
            26   25  27 1
            27   25  28 2
            28    5   9 1
            29   11  15 1
            30   12  13 1

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