KEGG   Clostridium perfringens 13: CPE1619
Entry
CPE1619           CDS       T00074                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpe  Clostridium perfringens 13
Pathway
cpe03420  Nucleotide excision repair
cpe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CPE1619
   03430 Mismatch repair
    CPE1619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpe03400]
    CPE1619
Enzymes [BR:cpe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CPE1619
DNA repair and recombination proteins [BR:cpe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPE1619
   MMR (mismatch excision repair)
    Other MMR factors
     CPE1619
SSDB
Motif
Pfam: UvrD-helicase AAA_19 AAA_11 DEAD UvrD_C_2 AAA_30 ResIII SLFN-g3_helicase T2SSE NACHT
Other DBs
NCBI-ProteinID: BAB81325
UniProt: Q8XJY4
Position
complement(1887300..1889591)
AA seq 763 aa
MSDNKILTYEREVLSETKRWIESEEERLEGEKLKANEKLDALNKKSKGAYDPEIEIVKKS
VDFLSKEEEKFKEAYNKPYFARIDFREYRKDFESFYIGKCGLGDMLEGEEKVIDWRAPLA
DLYYSGTQGEAYYKAPIGVIEGELSLKRKFLFDNEHNLKECFDEGINEIILKSGLNEEGD
GLIDEFLRINLENSTGTKLKDVVATIQKEQNDIIRAPKNSPLIIQGSAGSGKTTVALHRL
AYLLYRYKETITGEDILVVAPNKIFLDYISEVLPNLGVDKVEQKTFEELALKKLGMKGKV
ITKDKKLVEILENDLEKNKYIMNDSKIKGSILFKEMLDRYIQILEREDSDIDNIRICGYS
VFDSKEIKRLFLKDLIKYPVNKRKDEIKNYFSKKLGEKVSKVLDKVDFQYEYRIARLKKS
MEDSKERREKLIELYDERDNHKKEIKKSARKEFNEYFNRWKGIDTTNVYKNFFENKEIFN
EVTDGKIPEKLAEYMRENLANNIDKKIIDSDDLAAMLYLKFRIEGIEESSLLKHIVIDEA
QDYSMLQLYVMSMMASGKSLTIVGDIGQGIYSFKGINDWKEAIKLVYDENAEYKHLSQSY
RSTVEIINYANKVLVKQNTYEEPAKPVLRHGMVPEEIEFNNAKEFCERLDRIVKKVKDEG
KTSIAIVGKTLDECKKIRTLVKKYSNYDFELIKDDQKEFDLNLIIIPSYLTKGLEFDCTI
VYNLNKENYNDNEIDKKLLYVVLTRALHYEYIFYKEEKSPLIG
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgagtgataataagattttaacttatgagagagaagtcctttcagaaactaaaaggtgg
attgaaagtgaagaggaaagattagaaggtgaaaagttaaaagctaatgaaaaactagat
gctttaaataagaaatctaagggagcctatgatccagagatagaaatagttaagaagtct
gtggactttttgtcaaaggaagaagaaaaatttaaagaagcttataataagccatacttt
gcaagaatagattttagggagtatagaaaagattttgaaagtttttatataggtaaatgc
ggacttggtgatatgctagaaggagaagaaaaggtaatagattggagagctccacttgct
gatctttattatagtggtactcaaggagaggcatattataaggcacctattggggttatt
gagggtgagcttagtttaaagagaaaatttctttttgataatgagcataacttaaaggaa
tgttttgatgagggaattaatgaaattattttaaaatctggtcttaatgaagaaggggat
gggttaatagacgaattccttagaataaatttagaaaatagcacaggtactaaattaaaa
gatgtagtagctactatacaaaaagagcagaatgatataataagagcacctaaaaattca
cctttaataatacaagggtcagcaggttcgggaaaaaccactgtagcacttcatagacta
gcttatttattatatagatataaggaaaccataactggagaagatattttagttgtagcg
ccaaataaaatatttttagattatatttctgaagtgttgcctaacttaggagtagataag
gttgaacaaaaaacttttgaagaactagccttaaaaaagttaggtatgaagggtaaagtt
ataactaaggataaaaaattagtagaaattttagaaaatgatttagaaaaaaataaatat
ataatgaatgatagtaaaataaaagggtctatattatttaaagaaatgttagatagatat
attcaaattcttgaaagagaagatagcgatatagataatataagaatttgtggatattca
gtttttgattcaaaggagataaaaagattattcttaaaggatttaataaaatatcctgtt
aacaagagaaaggatgaaatcaaaaactatttttctaagaaattaggagaaaaggtaagt
aaagttttagataaggttgattttcagtatgagtatagaatagctagacttaaaaaaagc
atggaagattctaaagaaagaagagaaaaacttatagagctttatgatgagagagataat
cataaaaaagaaataaaaaagtctgctagaaaagaatttaatgaatatttcaatagatgg
aagggtatagataccactaatgtttataaaaatttctttgaaaacaaggaaatttttaat
gaagtaacagatggaaaaataccagagaagttagctgaatatatgagagaaaatttggct
aataatatagataaaaaaataatagattcagatgacttagcagctatgctttatttaaaa
tttagaatagaaggaatagaggaaagcagcttattaaaacatattgtcattgatgaggca
caggactattctatgctacagttatatgttatgtctatgatggcttcaggaaagtcttta
acaatagttggagatattggtcagggaatatattcatttaaaggaattaatgattggaaa
gaggctattaaattggtttatgatgaaaatgcagagtataagcacttaagccaaagctat
agaagtacagtagaaataataaattatgcgaataaggttttagttaaacaaaatacctat
gaagagccagcaaaaccagttttaagacatggaatggttccagaggaaattgaatttaat
aatgcaaaagaattttgtgaaagattagatagaatagttaaaaaagtaaaagatgaagga
aaaacttcaatagctatagttggtaaaacccttgatgaatgtaagaagataagaacttta
gttaagaaatattcaaattatgactttgaattaattaaagatgatcaaaaagagtttgat
ttgaatttaataattataccgtcatatcttactaaaggattagaatttgactgtactata
gtttataatttaaataaagaaaattataatgataatgaaatagataagaaacttctttat
gtggttttaactagagcgttacattatgaatatatattttataaagaggaaaaatcacct
ttaataggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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