KEGG T08631: 104390288

Chaetura pelagica (chimney swift): 104390288

Entry

104390288         CDS       T08631

Symbol

ZC3H12C

Name

(RefSeq) probable ribonuclease ZC3H12C

K18668

ribonuclease ZC3H12 [EC:3.1.-.-]

Organism

cpea Chaetura pelagica (chimney swift)

Brite

KEGG Orthology (KO) [BR:cpea00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104390288 (ZC3H12C)
Messenger RNA biogenesis [BR:cpea03019]
Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     104390288 (ZC3H12C)

SSDB

Motif

Pfam:

RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH_4

Other DBs

NCBI-GeneID:

104390288

NCBI-ProteinID:

XP_009997697

Position

Unknown

AA seq 889 aa
MSVCFPGNEYRTLYIQEYKENSKVESSTCSSFMGLKDHLGHDLGHLYVGSTGTQINAIVP
WSMAEKPTMDKVNSRKEDADKEASEETSGSSSCDSEESTNSDNDSERLNNSASESHLLPK
THRQLCRSPCLEPHILKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETEQTVTNANTSVMREASSIESQRSESPL
QEEVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCST
KNDGTSELKRATPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAAKPQS
TAPLTNGLPSGVHFPPQDQRPQGQYPAVMMTTKNHGTPMPYDQYPKCESPVDVGYYSMLS
AYSNLSVSGPRSPERRFSLDTDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPDP
QLEENLKCQHMHPHGRLNTQPFLQSYHEPLTRVQSYSHEEPKHHHKPPVPYMAVHLQHPA
ISARSSCPNDYSASQSSLHAKTMHLGRALVSTRIDSVSDSRLYDNSPLRHRKPYSGQDGL
GSWERQSYGMDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGIPQDPPRH
QDTREKVYINLCNIFPPDLVRIVMKKNPHMTDAQQLAAAILVEKSQLGY

NT seq 2670 nt +upstreamnt +downstreamnt
atgtctgtgtgttttccagggaacgaatacagaacactttatattcaggaatacaaggaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcatctgggg
catgatttaggccacctttatgtggggagcactggcacacaaataaatgcaattgtacct
tggtcaatggcggagaagccaacgatggataaggttaattctaggaaagaagatgcagac
aaggaggcatcagaagagacttctggaagctccagctgtgactctgaagaaagcacaaat
tctgataatgattcggagagactgaataattctgcatcagaatcgcatttattgcctaag
actcaccgacagctgtgccgatctccttgcttagagcctcatattctaaaaaggaatgaa
atcttgcaagactttaggatagaagaggctcagatagtacctaaggaagtcaaaaagccc
cctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggttactct
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaatgatatt
ttgggagaacttgtcaaacttgggaataaaactgagactgagcagactgtaactaatgct
aacactagtgtaatgcgtgaagcatcctccatagagtctcagaggtcagagtctccactg
caagaggaagtgacagaggatggtgacaacttgaggccaatagttattgatggcagcaat
gttgcaatgagccatgggaacaaagaagtattttcttgtcgaggaatcaaattggctgtg
gactggtttttggaaagaggccacaaggatgtgaccgtgtttgtgccagcgtggaggaaa
gaacagtcaagacctgatgctctcatcacagatcaagaaatcttacgtaaattagaaaag
gagaagattcttgtgttcacgccatcccgccgagtgcaagggagaagggtggtgtgctat
gatgaccgattcatagtgaagttggcttttgagtcagatggcatcattgtttctaatgat
aactacagggatctagctaatgaaaagcctgaatggaagaagttcatagatgagcgcttg
ctgatgtattcctttgttaatgacaaatttatgcctcctgatgatcctcttggtcgccat
ggtccaagtctagacaattttcttaggaagaagcctattgtaccagaacataagaagcaa
ccatgtccctatgggaagaaatgtacctatggacacaaatgcaaatactatcatccagaa
agagggaatcagcctcagcgatctgtagctgatgaacttcgtgccatgtctagaagcaca
gctgccaaaactactagtgaaggaggactggtaaaaagcaatagtgttccctgcagcact
aaaaacgatggcacttctgagctgaagcgcgctactccaaagaggcaatcggatcctagt
ataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgtaccttctttagttagtataccaagttcctctgctgccaaaccccaaagt
actgcacctttaactaacggccttccatctggagttcactttccacctcaggatcaaaga
ccacagggacagtatcctgcagtgatgatgacaaccaaaaatcacggaacaccaatgcct
tatgaccagtatccaaaatgtgagtctcctgtggatgtagggtattactctatgctgagt
gcatattcaaatctaagtgtatctggtccacgtagtcctgaaaggcgcttctccttggat
acagattataggataagctcggtagcttctgactgcagcagtgaaggaagtgtcagctgt
ggcagtagtgattcctatgtgggttacagtgatcgctcctacatgagttcgcctgaccca
cagctagaggagaacttgaagtgccaacatatgcacccccacggccgccttaacacccag
cccttcctacagagctaccatgagcctctcacacgagtgcaaagctatagtcatgaagaa
ccaaagcatcaccacaaacctccagttccatacatggctgtgcatctgcagcatccagcc
atcagtgctcgttccagctgtccaaacgactactctgcatctcagagttcgttgcatgca
aagaccatgcatctggggagagcccttgtgtccacgagaatagacagcgtttcagactca
cgtttatatgataattctccattaagacacagaaagccttattctggccaagatgggctt
ggaagctgggagaggcagagttatgggatggatgcctatggctaccgccagacctactcc
ttgccgagtaaccccacacagccgtgctacgagcagtttgccttccaaagcttgcctgaa
cagcaggaccagacctggcgtgttccttactgcggaatccctcaagaccctccacggcac
caagacacccgggagaaggtttacataaatctctgcaacatcttcccccctgatctggtg
aggatcgttatgaagaagaaccctcacatgacggacgctcagcagctcgctgcagccatc
ttagtggagaaatctcagctaggttattga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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