KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793780
Entry
111793780         CDS       T05351                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3
  KO
K11842  ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cpep01002]
    111793780
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111793780
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111793780
Peptidases and inhibitors [BR:cpep01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   111793780
Ubiquitin system [BR:cpep04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111793780
SSDB
Motif
Pfam: UCH UCH_1 Cnd1_N COP23
Other DBs
NCBI-GeneID: 111793780
NCBI-ProteinID: XP_023531586
Position
LG01:complement(4385885..4391746)
AA seq 369 aa
MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKS
SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL
LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQGLLTNE
TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ
KRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVV
VHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFY
ESIGAGNKS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgggtgctacgggctccaagctcgagaaggctctcggtgaccagtttcctgaaggcgag
cgctacttcggccttgaaaattttggcaatacttgctactgtaacagcgtcttgcaggca
ctgtatttttgtgttcctttccgggagcagttgttagattattactcaaataacaaaagt
agtggagatgcggaagaaaatcttctaacatgcttggcagatttgttcacccagataagt
tcacaaaagaaaaaaactggtgtaattgctccaaagcgttttgttcagagattgaaaaag
cagaatgagattttccgtagctatatgcaccaagatgctcatgaatttttgaactttttg
ctcaacgaacttgttgacatactggagaaagaggcacatgctactaaaagtgatgcagaa
agttcgtctccgtctgaaaaaattgcaaatggtcctaagactggccaggcaaatggttct
caaaaagagccgttggtgacttgggtacataaaaattttcagggcttactaaccaacgag
acaaggtgcttgcggtgtgagacggttacagcgagggatgaaacttttcttgacttgagc
cttgatattgaacagaacagttcaataactagctgcttaaaaaatttcagttccactgag
acattgaatgccgaggacaagtttttctgcgacaagtgctgcagtttgcaagaagcacag
aagaggatgaagattaagaaaccacctcatatccttgttattcacctgaagcggtttaaa
tacattgagcagcttgggcggtataaaaagctgttatacagagttgttttccctctcgag
ctgaagcttagcaacacaatggaggatgcggattctgagtactctttgtttgctgtcgtg
gtccatgttggaagtggacccaaccacggacactacgttagccttgttaaaagccataac
cactggttattttttgatgatgaaaatgtggaaatgattgacgagtctgttgtgcagaca
ttctttggatctgcacaagaatattctagcaatactgatcatgggtacatcctattctac
gagagtattggcgccggcaacaagagctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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