KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111809422
Entry
111809422         CDS       T05351                                 
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111809422
Enzymes [BR:cpep01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     111809422
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    111809422
 Prokaryotic type
    111809422
SSDB
Motif
Pfam: DNA_photolyase
Other DBs
NCBI-GeneID: 111809422
NCBI-ProteinID: XP_023551650
Position
LG13:1576240..1579560
AA seq 408 aa
MISKKHFKSLSSCSRVGILKGEAEHTIPNFIRECEASLLVTDFSPLREVRKCKEEICKRV
DESVKVHEVDAHNVVPIWIASEKLEYSAKTLRGKINKKLPEYLIDFPALLIPTRKWPSTH
KFIDWDRLIDDNMRKGADVPEIEWCKPGEKAAMEVLMGRKDGFLTKRLKSYAIDRNNPLK
PRGLSGLSPYLHFGQISAQRCALEARNVRKLNPQAVDMFLEELIVRRELADNYCYYQPNY
DSLLGAWEWARKTLMDHASDKREHVYTREQLEKAQTADPLWNASQLEMVFHGKMHGFMRM
YWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVGCMWSICGVHDQGWKERPIFGK
IRYMNFAGCKRKFDVDGYIAYVKRVVGEVKKRKAGEVVVDRKAKELRC
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgatctcgaagaaacacttcaaatccctttcttcttgttccagggttggcattcttaag
ggggaagctgaacatactataccaaatttcattagagaatgtgaggcttcactactggtt
acagacttctcgccgttacgagaagttcgaaagtgtaaagaggaaatttgtaagagggta
gatgaatcagttaaagttcatgaagttgatgcacacaatgtggtacccatttggattgcg
tctgagaaattggagtatagtgcaaaaactttaaggggcaagataaataaaaagctcccg
gaataccttattgacttccctgctctgcttataccaactagaaaatggccttccactcat
aagtttattgattgggacagacttattgatgataacatgaggaaaggagcagatgttcct
gaaattgaatggtgtaaaccaggggaaaaggctgcaatggaagtattgatgggcaggaaa
gatgggtttttgactaagaggttgaagagctatgcaatagatagaaacaatccattgaaa
cctagggggctctctggcctctccccatatttgcattttggtcaaatatccgcacaacgc
tgtgccttagaagctcgtaatgttcgtaaactcaatccacaggccgttgatatgtttctc
gaggagttgattgttagaagggaacttgctgataattactgctactaccaaccgaactat
gattcactgctcggggcttgggaatgggcacgtaaaaccttgatggatcacgcttccgat
aagcgagaacatgtttacacgagggagcaactggagaaggcgcagactgctgacccactc
tggaatgcttctcagttggagatggtcttccatggaaagatgcatggttttatgaggatg
tactgggccaaaaagattttggagtggacaagaggacctgaggaagccctggaaatttgc
atatacttgaatgacaagtatgaaattgatgggagggatccaaatggatacgtcgggtgc
atgtggtcgatctgtggcgttcacgaccagggctggaaagagcgacccatatttgggaag
atacgatacatgaacttcgctgggtgcaagaggaaattcgatgtggatggctacattgct
tatgtgaagagagttgtgggtgaagtgaagaaaagaaaagcaggggaggttgtggtggat
agaaaggcaaaggaactccgatgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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