KEGG   Chlamydia pecorum W73: CPE2_0962
Entry
CPE2_0962         CDS       T02855                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cper  Chlamydia pecorum W73
Pathway
cper03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CPE2_0962 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cper03400]
    CPE2_0962 (recD)
Enzymes [BR:cper01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CPE2_0962 (recD)
DNA repair and recombination proteins [BR:cper03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CPE2_0962 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 SLFN-g3_helicase UvrD-helicase AAA_22 DEAD PhoH Helicase_RecD PIF1 AAA_11 ResIII nSTAND3 IstB_IS21 AAA_25 Pkinase_fungal UvrD_C ATPase SNF2-rel_dom CbiA T2SSE AAA DUF1246 RNA_helicase
Other DBs
NCBI-ProteinID: AGW39353
Position
complement(1098526..1100052)
AA seq 508 aa
MIESSPKIPDVLKDLLQQHAVSPLDVVFARRHTPPNTEKAMLFLAASSALWRHGYPFLCL
LEDRLVPSVPGLSEQVFFQGFQEFSENSSEELFVVAEKKLYLRSLYETRKKLFQKLTRVS
LAQPMFPSLKHLPKELSQAQAHTLQQVSQRCFSIVCGGPGTGKTFLAIQLIVALINENPH
MRIIVVSPTGKVAAHFRKVLANYSLPDTAISVHTIHHFLQEYAHQQYSTMNVLIVDEGSM
VDFHLLHSLVQTLPGRYTPCGKVQSASMIIFGDKNQLPPIGIGAGNPLQDLIETFPESTM
HLEVSYRAKTQDIQEIAQAILSHQMVPFSPLPPFSVAIELFADAFQRALSRGVSLCVLSP
MRLGVWGYVNLNRFIHHELQKRNPLLPVPIIVSNRYETWGLCNGDTGVLSVQQQKLMFSQ
EIVIDAQAFSNYTYNYAMSVHKSQGSEYDEVLVVVPKGCEIFESSLLYTAVTRAKSKLSI
WADAETLTKIIKKPRKYSFQGLDKALKH
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgatagaatcttccccaaagatcccagatgttcttaaagatttgctacaacagcatgcc
gtttcccctttagatgttgtttttgcacgtagacacacccctccaaacactgaaaaagca
atgctatttttagcggcctcttcagctttatggcggcatggctatcccttcctctgtctt
ttagaagatcgcttggtgccctcagttcctggactctctgaacaagttttttttcaaggg
tttcaggagttttccgaaaactcttctgaggagttatttgttgttgctgaaaaaaagttg
tatttgcgctccctatatgagacgcgcaaaaaactttttcagaaacttaccagagtgtct
ttagcacaacctatgttcccgagcttaaaacacctccctaaagagctatctcaagcacaa
gcgcatacattgcagcaagtttctcaaagatgtttttctatagtttgtggggggcctggg
acgggaaagacgtttttagccatacagctgatagtagcattaattaatgagaatccccat
atgcgtattattgtggtttcccctacagggaaggttgcagcgcatttccgcaaggttctt
gctaactattctctaccggacacagccatttcggtccatacgatacatcattttttacaa
gaatatgcccatcaacaatacagcacaatgaatgttcttattgttgatgagggctctatg
gtagattttcacttgcttcatagtcttgtacaaactcttcctgggcgctataccccatgt
gggaaggtacaatccgcgagtatgatcatttttggagataaaaatcagcttccccccata
ggaattggtgcggggaatcccctacaagatttaattgagactttcccggaaagcacgatg
catcttgaagtctcttacagagcaaaaacccaagatatccaagagattgcccaagcgatc
ttgtcacaccagatggtccccttctctccccttcctcctttttccgtagctatagagctt
tttgcagacgcttttcaacgagcattatctcgaggggtaagcttgtgtgtgttgtctcct
atgcgcttgggagtgtggggatatgtaaatttaaatcgttttattcatcatgaacttcaa
aaacgtaatcccctcttgcctgtcccaattatagtttccaaccgttatgaaacttgggga
ttatgtaatggagatacaggagttctttctgttcaacaacaaaagctcatgttctctcaa
gagatagttatagatgctcaggcattctctaactatacctataactatgccatgtccgtc
cataagagccagggaagcgaatacgatgaagttctcgttgtcgtgcctaagggatgcgaa
atcttcgaatcttctttgctctatactgctgtgacacgagcaaaaagtaaactctctatt
tgggctgatgctgaaacactaacgaaaatcataaaaaaaccccgaaagtatagctttcag
ggtttagataaagcattaaagcactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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