KEGG   Chrysemys picta (western painted turtle): 101935749
Entry
101935749         CDS       T04662                                 
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101935749 (SNRPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpic03041]
    101935749 (SNRPD1)
   03032 DNA replication proteins [BR:cpic03032]
    101935749 (SNRPD1)
Spliceosome [BR:cpic03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101935749 (SNRPD1)
  U2 snRNP components
    101935749 (SNRPD1)
 Complex B
  U1 snRNP components
    101935749 (SNRPD1)
  U4/U6.U5 tri-snRNP components
    101935749 (SNRPD1)
 Complex C
  U2 snRNP components
    101935749 (SNRPD1)
DNA replication proteins [BR:cpic03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101935749 (SNRPD1)
SSDB
Motif
Pfam: LSM Gemin7 Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 101935749
NCBI-ProteinID: XP_005278666
UniProt: A0A8C3IFX1
Position
2:82649059..82672926
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgaggtttctaatgaaattgagtcatgagactgtgaccattgaactgaag
aatggaacacaggtgcatggaacaatcacaggagtggatgtcagtatgaatacgcatctt
aaagctgtgaaaatgacactgaagaacagagagcctgtacagttggagacattgagtatt
cgaggaaataacattcgatacttcattctgccagacagcttacctctggataccttgcta
gtggatgttgaaccaaaagtcaaatccaagaaaagggaagcagttgcaggaagaggccgt
ggcagaggtcggggcagaggccgtggccgtggcagaggaagagggggacctaggcgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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