KEGG   Campylobacter pinnipediorum: CPIN18020_0382
Entry
CPIN18020_0382    CDS       T05033                                 
Symbol
addA
Name
(GenBank) exonuclease V, helicase AddA
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
cpin  Campylobacter pinnipediorum
Pathway
cpin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CPIN18020_0382 (addA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpin03400]
    CPIN18020_0382 (addA)
Enzymes [BR:cpin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CPIN18020_0382 (addA)
DNA repair and recombination proteins [BR:cpin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CPIN18020_0382 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 Cas_Cas4 AAA_30 Terminase_6N Bunya_NS-S
Other DBs
NCBI-ProteinID: AQW85621
Position
complement(342004..344766)
AA seq 920 aa
MKNFFGLKASAGSGKTFALSVRYVALLLKGAKTQNIIALTFTKKAASEMSERIVSLFLNL
DQKKAELAEISKLLRISENEVIDKRDELKSDFLSSNLKIMTFDAFFSTILRSFSLNLGLN
PDYDIKDIGSDVFKENFINQIAKDEKLLKSLAIYILEFSKGQNDFFETLEMLYDNFSEIN
IASRVSYPNDNKVMSLCNQIKTYIQNKNGSNTAINAFNVANALELCEKSVIQRESLNYQT
FSKVYDDELDVYFDELKDELQRYINDLEKYKLNELNQFLKTYKDIKTDLNKKLNELSFSD
ITRFTNELLYNNLDKQMLYFRLDGTISHLLIDEFQDTNVTQYNIIFPIIEEIVAGYGQTG
LGSFFYVGDIKQSIYRFRGGKKELFDKLKDDFKQIEVESLKTNYRSAKFLVEFVNEKMKD
KFNTQNSNQEDNFTEQIPNSDKNGYIKVAECDDVVQSCVDEAKRLLGLGVQSKDITVLCW
KNDDIKTICDKLKAQNIPSTDEGAMLLKNSKPVFGLINYAKFCLFGDRIYRQNFISYFGF
EPTKVKLDLNKTANECLYYLAKTANISMQDLDILRLFEISSSSSDIVSFLFEFENSDEKA
INSDSFGVRVMTTHKSKGLEFDTVILCDKLSKGRQGKGRFICEYDIKSGWQIKLNVSNRE
FFDKEYKKLIEQSESLDKEEEINKLYVALTRAKNNLIILKTNNPDASRPSYFSKYKLKSG
KVYDYLDLEICEKGSIKIEQNSSDSTSKTTKKIELVSVEKDTTTNKEKEYELNLNSIYFG
TALHFLLEMTKSFDEKSLRYQEDALRDKFSKFLSKDELDEIVTRCINLVNDSDFKELVKD
SVIKKEQSIYYKEQTKQLDLMSVKNYTITIVDYKSSKKDIENNKKQVLEYTKIVKEIYPD
MKVCGIIFYVLKDGIEKIII
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaaaaatttctttgggctaaaggcaagtgccggtagcggtaaaacatttgcacttagc
gtaagatatgtggcacttttactcaaaggggcaaaaacacaaaatatcatagcacttaca
tttacaaaaaaagcagccagtgagatgagcgaaaggatagtatctctttttttaaatcta
gatcaaaaaaaagcagaactagcagaaatttcaaaacttctaagaataagcgaaaatgaa
gttatagataaaagagatgagcttaagagcgactttttaagctcaaatttaaagataatg
acatttgatgcgttttttagcactatcctaagaagctttagcttaaatttaggactaaat
ccggactatgatataaaagatataggtagcgatgtatttaaagaaaatttcataaatcaa
atagcaaaagatgaaaaactactaaaatcattggctatttatatacttgagttttcaaag
ggtcaaaatgatttttttgaaactcttgaaatgctatatgataattttagtgagataaat
atagccagcagagtgagttatccaaacgataataaagtaatgagcttatgtaatcaaata
aaaacatacatacaaaataaaaatggctcaaacacagcaataaatgcctttaatgtagct
aatgccttagaactttgcgaaaaaagcgtgatacaaagagagagcttgaactaccaaaca
ttttcaaaggtttatgatgatgagcttgatgtgtattttgatgagctaaaagatgaattg
caaagatatattaacgaccttgagaaatacaagctaaatgagctaaatcagtttttaaaa
acatataaagatatcaaaacagacttaaacaaaaagctaaatgagcttagtttttctgat
ataacaaggtttacaaatgagctactttataacaacttagataagcaaatgctttatttt
aggctagatggcaccatatcacaccttttaatagatgagtttcaagatacaaacgtaaca
caatacaatataatatttcctataatagaagagatagttgcaggatacggacaaactggg
cttggaagctttttttatgtaggcgatataaagcaaagtatttataggtttcgtggcggt
aaaaaagagctttttgataaattaaaagatgattttaaacagatagaagttgagagttta
aagacaaattatagaagtgctaagtttcttgttgagtttgtaaatgaaaagatgaaagat
aaatttaatacccaaaacagcaatcaagaagataattttaccgagcagataccaaatagc
gataaaaatggatatataaaagttgctgagtgcgatgatgtagtgcaaagctgtgttgac
gaagcaaaaagacttttaggcttaggagtgcaaagcaaagatataactgtgctttgctgg
aagaatgatgatataaaaacaatatgcgacaaattaaaagcccaaaacataccatccacc
gatgaaggggcaatgctacttaaaaactcaaaacctgtctttgggcttataaactacgct
aaattttgtctttttggagataggatatatcgtcagaattttatatcgtattttggattt
gagcctacaaaagtaaaactagaccttaacaaaacagcaaatgagtgtctttattatctt
gcaaaaacggcaaatatatcaatgcaagaccttgatatactaagactttttgagataagc
tctagttcatctgatatagttagctttttgtttgagtttgaaaactcagatgaaaaagcg
ataaatagcgatagctttggcgtaagagttatgacaacacacaaatcaaaagggcttgag
tttgataccgtaatactttgcgataaactatcaaaaggaagacaaggtaagggtagattt
atatgcgaatacgatataaaatcagggtggcaaataaaacttaatgtttcaaatagagag
ttttttgacaaagagtataaaaaactcatagagcaaagcgaaagtctagataaagaagaa
gagataaataagctatatgtggctttaacaagggccaaaaataatctcatcatactaaaa
acaaacaacccagatgcatcaagacctagttattttagtaaatacaaactaaaaagtggt
aaggtgtatgactatcttgatctggaaatttgcgaaaaaggctctataaaaatagagcaa
aatagtagcgatagtacaagcaaaacaacaaaaaaaatagagcttgtaagtgtagaaaaa
gacacaacaacaaataaagaaaaagagtatgagctaaatctaaatagcatatattttgga
actgctcttcatttcttgcttgaaatgacaaagagttttgatgaaaaaagcttaaggtat
caagaagatgctttaagagataaattttctaaatttttatcaaaagatgagcttgatgag
atcgtaacaagatgtataaatttggtaaatgatagtgattttaaagagttagtaaaagat
tctgtcataaaaaaagaacaaagcatatactacaaggaacaaacaaaacagcttgatttg
atgagtgttaaaaactataccataacgatagttgattataaaagttctaaaaaagatata
gaaaataacaaaaagcaagttttagaatatacaaagatagttaaagaaatctatccagat
atgaaagtttgtggcattatattttatgttttgaaagatgggatagaaaaaattattatt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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