KEGG   Coprothermobacter proteolyticus: COPRO5265_0686
Entry
COPRO5265_0686    CDS       T00773                                 
Name
(GenBank) rRNA-uridine isomerase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
cpo  Coprothermobacter proteolyticus
Brite
KEGG Orthology (KO) [BR:cpo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpo03009]
    COPRO5265_0686
Enzymes [BR:cpo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     COPRO5265_0686
Ribosome biogenesis [BR:cpo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    COPRO5265_0686
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ACI17793
UniProt: B5Y8D7
Position
625535..626482
AA seq 315 aa
MGNEADRVITGIVQQEARLDLALMEIIDDEGISRTWIQNNIKAGLVRCNGDVVTKPSLRV
KKGDLLEIRLRSRISELQPADVEYSVVYYDEHLAVIDKPPNLVVHPAPSVKGLTLCHGLL
KDFPQVKNVGSAERPGIVHRLDKDTSGLMLVALSEKGYAGLTKMISEKSVSRKYLVAVYG
VANRPFEVDAPIGRDPRNPTRMAVVPHGKNAYTRFRPVQCLEKVSLLEAELFTGRTHQIR
VHLSHAGFYVLGDPVYGNVESRLLAPRVFLHSYYLELEHPITGERLFFVSPLPEDLDECW
HILGGGDVVYPTICA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgggcaatgaagcagatagggttattaccggaatagtccagcaagaagctaggttggat
ttagctctaatggagattatagatgatgagggaatatctcggacgtggatacagaataac
attaaggccggcctggttaggtgcaacggtgacgtggtaacaaagccttctttaagggta
aaaaaaggcgatctcttagaaattaggttgcggtcaagaataagcgaactccaacctgct
gatgtggagtactcagtggtttattacgatgaacatttggcagttattgataagcctcca
aacttggtggtgcatcctgctccaagtgttaaagggctaactctttgccatgggttactc
aaggattttccgcaagtgaagaatgtgggtagtgctgagcgtccaggtattgtgcaccgg
ctggataaagacacttctggactaatgcttgtagctctttctgaaaagggctatgcaggt
ttgacaaagatgatcagtgaaaaaagtgttagcaggaagtatttagtggcggtttacggt
gttgcaaacaggcctttcgaagtggacgctcccattggtagggatccgagaaacccaaca
cgtatggctgtggttccgcatggaaagaatgcctatacgcggttccgacctgtacaatgt
ttggaaaaggttagtctgttggaggctgagcttttcactggtagaactcatcaaattaga
gtccatttgagccatgccggcttttatgttcttggagatcccgtttatggaaacgtggag
agccgtttgctggcgccaagggtgtttcttcacagttactatttggaactggaacaccct
attactggtgagcgtctgttttttgtcagtcctctgcctgaggatttagatgaatgttgg
catattttaggaggcggtgacgttgtataccctacgatttgtgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system