KEGG   Coprothermobacter proteolyticus: COPRO5265_0979
Entry
COPRO5265_0979    CDS       T00773                                 
Name
(GenBank) pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cpo  Coprothermobacter proteolyticus
Brite
KEGG Orthology (KO) [BR:cpo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpo03016]
    COPRO5265_0979
Enzymes [BR:cpo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     COPRO5265_0979
Transfer RNA biogenesis [BR:cpo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    COPRO5265_0979
 Prokaryotic type
    COPRO5265_0979
SSDB
Motif
Pfam: PseudoU_synth_1 DUF5768
Other DBs
NCBI-ProteinID: ACI17557
UniProt: B5Y955
Position
complement(874600..875379)
AA seq 259 aa
MVKYAGLLQFKGTNYAGFQRQKNGTAIQNVLESTLSQINNRATVVRYSGRTDAGVHAWGM
PFVFWGREDLSADKWMFILNRMLPKDMRVISVVRTSPEFDPQLSAVAKQYLYCATQERLG
PLWDDFFAYLPNLSIETSAVISAARKLVGEHDFKGFSKKGSSVKSTRRKLYEVSVMFTHS
RMYFSFVGNGFLYGMVRLMVGTLLQIGWGKQDVNFIDEVLSGNAVANYSAPAQGLHLVKV
WLEPDPFLESVKANERDFS
NT seq 780 nt   +upstreamnt  +downstreamnt
atggtaaagtacgctggtttacttcagtttaaggggacaaactacgctggttttcaaaga
cagaagaatggaacagcaattcaaaatgtgttggaatcaacgttgagtcaaattaataat
agagcaaccgtagtacgctactcaggcagaacagacgcaggagtccacgcttggggaatg
cctttcgtcttttggggaagggaagatctttcagcagataaatggatgttcatattgaac
cgcatgctacctaaggatatgcgtgttatttccgtagttagaacgtcacctgagttcgac
ccacagctaagcgctgtggcaaagcagtatttgtactgcgccacacaggaaagattaggt
cccttgtgggacgatttttttgcctacttaccaaatttatcaattgaaacctctgccgta
ataagcgccgcaaggaaactcgtgggagagcacgactttaaagggttttcaaaaaaaggg
tcctctgttaagagtacgcgacgcaagttgtatgaggtgagcgtcatgtttacccattcg
cgtatgtacttttcttttgtgggaaatggctttttgtatggcatggtcaggctcatggta
ggaactttattgcagattgggtggggtaaacaagatgtaaacttcattgatgaggtgtta
agtggcaatgcggtggctaactactctgcacccgcccagggtttgcatctggtcaaggtg
tggctagagccagatcccttcttagaaagtgtcaaagctaacgaacgagattttagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system