KEGG   Cavia porcellus (domestic guinea pig): 100712742
Entry
100712742         CDS       T07777                                 
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
  KO
K12856  pre-mRNA-processing factor 8
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100712742 (Prpf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpoc03041]
    100712742 (Prpf8)
Spliceosome [BR:cpoc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100712742 (Prpf8)
 Complex C
   U5 SnRNP specific factors
    100712742 (Prpf8)
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 100712742
NCBI-ProteinID: XP_003469727
Ensembl: ENSCPOG00000010379
UniProt: H0VGR9
Position
Unknown
AA seq 2335 aa
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq 7008 nt   +upstreamnt  +downstreamnt
atggccggagtgtttccataccgagggccgggtaacccggtacccggccctctagccccg
ttgccggactatatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcagttg
caagccaagcgctatgcagaaaaacggaagtttggatttgtggatgctcagaaggaagac
atgcctccagagcatgtcaggaagataatcagagaccatggagacatgaccaataggaag
tttcgccatgacaaaagggtctatttgggtgccctgaagtacatgccccatgcagtcctc
aagcttctggagaacatgcctatgccttgggagcagattcgggatgtacctgttctgtac
cacatcactggagcgatttctttcgtcaatgagattccctgggtcattgagccagtctac
atctcccagtgggggtcaatgtggattatgatgcgaagagaaaaaagagacaggaggcat
tttaaaaggatgcggttccccccttttgatgatgaggaaccgcccttggactatgctgac
aatatcctagatgttgagcccctggaagccattcagctagagctggaccctgaggaggat
gcccctgtactggactggttctatgaccaccagccactgcgagacagcaggaagtacgtt
aatggctccacttaccagcgttggcagttcacgttacctatgatgtccactctctaccgc
ttagccaatcagcttctgacagatttagtggatgacaactatttctatctgtttgaccta
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcatcattcggcagcctattcgcactgagtacaagattgcttttccttacttatac
aacaaccttccacaccatgtccaccttacctggtaccacactcccaatgtcgtgttcatc
aaaactgaggatcctgacttgccagctttctacttcgaccctttgattaacccgatttcc
cataggcattcagtcaagagccaggaaccactgccagatgatgacgaagaattcgagctc
ccagagtttgtggagcccttcctgaaggacacacccctgtacacagacaacacggccaat
ggcattgccctgctttgggctccacggcctttcaatttacgctctggtcgcacccgccgg
gctctggacataccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagagtctcctaccagaagctgcttaagtactacgtgctgaatgctctgaag
catcggcctcctaaggctcaaaagaagaggtatctgttccgatcttttaaagctaccaaa
ttctttcagtccacaaaactggactgggtggaagtgggactccaagtttgccgtcagggt
tacaacatgctcaacctcctcatccaccgtaaaaacctcaactacctgcacctggattat
aattttaacctcaagcctgtgaagaccctcaccaccaaggaaagaaagaaatcccgtttc
gggaatgctttccacctatgtcgggaagtcctgcgtttaacaaagctggttgtggacagt
catgttcagtatcgactgggcaatgtggatgccttccagctggcagatggattgcagtat
atatttgcccatgtgggacagctgacaggcatgtatcgatataagtacaagctgatgcga
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgcttcaacacgggacct
gtggggaaaggccccggctgtggcttctgggctgctggttggcgggtctggctgtttttc
atgcgaggcattactcctttgctagagcgatggctgggcaatctcttggcccggcagttt
gaaggccgacactcgaaaggggtggcaaagacagtgacaaagcagcgagtggagtcccat
tttgaccttgagcttagggcagctgtgatgcatgacatcctggacatgatgcctgagggg
atcaaacagaacaaggcccgaacaatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaatattccttggaaggttccaggactgccaacacccatagagaacatgatcctt
cgatatgtgaaggccaaagctgactggtggaccaacactgcccactacaaccgagaacgg
atccgtcgaggagccactgtggacaagactgtttgcaaaaagaaccttggccgcctcact
cggctctacttgaaggcagaacaggagcggcagcacaattacctgaaggatgggccttac
atcacagcagaggaagcagtggcagtgtataccaccactgtgcattggttggaaagccgc
aggttctcacccatcccattccccccactgtcctacaagcatgacaccaagttgcttatc
ttggctttggagcgactcaaggaagcttatagtgtgaaatctcggttaaaccagtctcag
agggaggagctaggtctgattgaacaagcctatgataacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaggtgggcattgagttcatggat
ctgtatagtcaccttgtgccagtatatgacgtggaacctctggagaagataactgatgca
tacctagaccagtacctgtggtacgaggcagacaagcgccgccttttcccaccctggatc
aagcctgcagacacagaaccacctccactgcttgtttacaaatggtgccaaggcatcaat
aaccttcaggatgtgtgggagacaagtgaaggcgagtgcaatgtcatgcttgaatctcgt
tttgagaagatgtatgagaagattgacttaaccctgctgaataggctactacgactcatc
gtggaccataacatagctgactacatgacagccaagaacaatgttgtcatcaactataag
gatatgaaccacacaaattcatatgggatcatcagaggcctgcagtttgcctcattcatc
gtgcagtactatggcttggtgatggatttgctggtgttgggattacaccgggccagtgag
atggcagggccccctcagatgccaaatgactttcttagtttccaggatatagccactgag
gctgcccaccccatccgactcttctgtcgatacattgaccgcatccatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgctatctgacagagcatcctgaccct
aacaatgaaaacatcgttggttataataacaagaagtgctggccccgagatgcccgcatg
cgccttatgaagcatgatgtcaacctgggtcgggcagttttctgggacatcaagaaccgc
ctgccacgatcagttacaacggttcagtgggagaacagcttcgtgtctgtgtatagtaag
gacaaccccaacttgctgttcaacatgtgtggctttgagtgccgcatcctgcccaaatgc
cgcaccagctacgaggagttcacccataaggatggggtttggaacctgcagaatgaggtc
actaaggagcggacggcccagtgtttcctgcgtgtggacgatgagtcaatgcagcgcttc
cacaaccgcgtgcggcagatcctcatggcctctggctccaccactttcaccaagattgtg
aataagtggaatacagctctaattggcctcatgacatactttcgggaggctgtggtgaat
acccaggaactcttggacttactagtaaagtgtgagaacaagatccagacacgtatcaag
attggactcaactccaagatgccaagtcggttcccccctgttgtgttctacacccccaag
gaattgggtggactcggcatgctttcaatgggccatgtgctcatcccccagtctgacctc
aggtggtctaagcagactgatgtgggtatcacacactttcgctcaggaatgagccatgaa
gaagaccagctgatccccaacttataccgttacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccatcgctcagaac
agacgactgactttagaagatctagaagactcatgggatcgtggcattcctcggattaat
actcttttccagaaggaccggcacacgttggcttatgataagggctggcgtgtccgaact
gactttaaacagtatcaggttttaaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaatctaaacaactatcgcacagatatgatccaggcgctgggtggt
gtggaaggcatactggaacacacactcttcaaaggcacttacttccccacctgggagggt
cttttctgggagaaggccagtggctttgaagaatctatgaaatggaaaaagctaactaat
gcacagcgatcaggattgaaccagattcccaatcgtagattcactctctggtggtcccca
accattaaccgagccaacgtgtatgtgggcttccaggtacagctggatctgacaggtatc
ttcatgcatggcaagatccccaccctgaagatttctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgaccaggaa
ctagatgcactggaaattgagacagtacaaaaggagacaatccatcctagaaagtcctat
aagatgaactcttcctgtgcagatatactgctctttgcctcctataaatggaatgtttcc
aggccctcactgctggcagactccaaggatgtgatggatagcactaccactcagaaatac
tggattgacatccagttgcgctggggagactatgattcgcacgacattgagcgttacgcc
cgggccaaattcctggactacaccacagacaacatgagtatctatccttcacccactggt
gtgctcatcgccattgacctggcttacaacctgcacagtgcctatggaaattggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacgaatccgcaaggggcttcagctctattcctctgagcccactgag
ccttacctgtcctctcagaactatggcgagctcttctccaatcagattatctggtttgtg
gatgacactaatgtctacagagtgactatccacaagaccttcgaagggaacttgacaacc
aagcctatcaacggggccatctttatcttcaacccacgtacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaaacgtttggggcagctggcgaagtggaag
acagctgaggaggtagctgcccttattcgatctttgcctgtggaggagcagcccaagcag
atcattgtcaccagaaagggcatgctggatccgttggaggtacatttattggacttcccc
aacattgtgatcaaaggatcggagctgcagcttcccttccaggcttgtctcaaggtggag
aagtttggggatcttatccttaaagccactgagcctcagatggttctcttcaacctctat
gatgactggctaaagaccatctcatcctacacagctttctcccgtctcatcctgattctg
cgtgctctgcatgtgaacaatgaccgggcaaaggtgatcctgaagccagacaagaccact
attacagaaccccaccacatctggcccaccctgaccgatgaggagtggatcaaggtggag
gtgcaactcaaggatctgatcctggccgattatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaatcagagacatcatcctgggaatggagatctctgcgccgtct
cagcagcggcagcagatagccgagattgaaaagcagaccaaggaacagtcccagctgact
gcaacacagactcgcacagtcaacaaacacggtgatgagatcattacctccaccaccagt
aactatgagacccagactttctcatcaaagactgaatggagagtcagggccatatccgct
gccaatctgcacctacggaccaatcacatttatgtttcatctgatgacattaaggagact
ggctacacttatattcttcccaagaatgtgcttaagaaatttatctgcatatctgacctt
cgtgcccaaattgcaggatacctatatggggtgagcccaccagataacccccaggtgaag
gagatccgatgcatcgtgatggtgccgcagtggggcacgcaccagactgtgcatctgcct
ggccagctgccccagcatgagtatctcaaggagatggagcccttaggttggatccacaca
cagcccaatgagtccccccagctgtcaccccaggatgtcacaacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagaccatcatcatcacttgcagcttcacccca
ggctcctgcacgctgacagcctacaagctgacccccagtggctatgaatggggccggcag
aacacagacaaaggcaacaaccccaagggttacctcccctcacactatgagagggtccag
atgctgctgtcagaccgcttcctcggcttcttcatggtccctgctcagtcctcatggaat
tacaacttcatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtccacagaccatcccacttcctcaactttgccctccta
caggagggcgaggtctactctgcagaccgggaggacctctatgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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