KEGG   Cavia porcellus (domestic guinea pig): 101787829
Entry
101787829         CDS       T07777                                 
Symbol
Rif1
Name
(RefSeq) LOW QUALITY PROTEIN: telomere-associated protein RIF1
  KO
K11138  telomere-associated protein RIF1
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    101787829 (Rif1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpoc03032]
    101787829 (Rif1)
DNA replication proteins [BR:cpoc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    101787829 (Rif1)
SSDB
Motif
Pfam: Rif1_N V-ATPase_H_N NICE-1
Other DBs
NCBI-GeneID: 101787829
NCBI-ProteinID: XP_023416896
Ensembl: ENSCPOG00000037898
Position
Unknown
AA seq 2469 aa
MSALGENPLLPLLETLEDSSAFPGEQTDAYLTLTSRMTGDEGKEVVIEMEKNLPRLYKVL
KTHISNQNSELSSAALQALGFCLYNPKITSGLSEANIQELLSELNDIIKSSDKNVRTRAL
WVISKQTFPTEAVGRMVSSIIDSLEIILTKGEIHSAVVDFEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIANITEHLMTTKLISELQKL
FMNKNETYVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGTPMIKKIAFIAWKSL
IDNFALNSDIYCXCTRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISDSSTSPPGNSSRVAASPGLSPMTPVHKGASPYGVPVTTRMNMSTNLGGMA
AIPSIQLLGLEMLLHFLLGPEVLNFAKQHKLVLNLEPLEHPLISSPSFFSKHAHTLITAV
HDSFVAVEEDALYLLCLTDAVVNAIWKALISLVNSLTESGNKKEKPGSEVLTLLLKSLES
VVKSEVLPISKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFSCYIQE
CGIADERFFLNLESLVGCVLSGPTSPLAFSDSVLSVINQNAKQLENKEHLCRMWSIIVTP
LTELINQTNEVNQGDALEHNFSAIYSALTLPINHIFSAQRFPVVTMKALLRTWSELYRIF
ARCAALVATTEENLCCEELSSKIMSTLEDEAFLNLLFLDRIIHIITVIVDCIDFSPYNNK
YQPIVKSPQRSSDWAKKKKEPLGKLASLFKLTVRVICSFHTLSFKETHSDTLLGIGNSII
NMISNLLGHISLPSVIRKIFTVLTRPLALFYENSNLDEVPKVYSSLNNKLEKLLGEIVTC
LQFNAGTFDSELLEQLSPLLCIIFLHKNKQIRKQCAQFWNATFAKVMMLTYPEELKPVLR
EAKQKVLLLLPGLENVEIMEESSASYSDATENSQLNIKISGLERKSNGKRDSFLAQTKGR
KENVKLSAKLKRESSSLRVKSEPLLEEEKSTDFVLIPPEGKESKERILTEHQKEVLKTKR
CDIPAMYNNLDVSQDTVFTDHYSQEDSVQTPTLTEKPKEDTKVVTKEEQMKSDTVIQDAL
ENCGMDEHVKKASFSNNECGFVPKTNPEIMSGSNEARKNSLISSKKTSTECASSAENSLV
SSQSISDASISETPPQTTSRRQSFITLEKFDGSENRPFSVPSLSSMSSNTLVQNSQENMT
TTDNTSKTNKREMMHSKSDSEKNLHGIRKSSRRLSKVEKSASKRSKPLIKSQQEENQELV
EGTISLENNSPVFFNQTDCSSDGQTHISDSVPEHEDRRPKLTLENTVLLENGTVQDKNMG
INLESKENTPPAQPPADQIVNEDSQVQVTPNQKTLRRSSRRRSEITDAVGDNQDKENSHQ
KKERHKEEEKLQGLLHVKDDVLPKQKLTYEQTGQENLLEKESNLHEKACGETSVNADIDQ
SKRKPDLENVNSQGDSALDIVDKSSERPLRGRTRYQTRRLSQGLLSSIENSESDSSEAKE
EGSRKKRSGKLKNKNNDSIDTEQEEKITEEESGSVTNHTQDYKAISEIDVDKKPQVLEKG
QSNTIILQDSKTSVGMLQVSVDVPNTCEERVKTTKCLESSFASSPMPESNLKTRNASKRS
VKQDSDNSVGECSRIGASEMSTLSEKNVQTIECHHKRSRRVRRSKGCDCCGEKSQPQEKS
PIGLRNTENTDIKSSEIKTSVQTPDTVLETDSKANLCSEVKVLDERASVSFSLVLKGNDT
INDSVLGPETELKKNTIQKSSEIISLKEKACDTNSGEACDTNSGEALCPESEEPSNKKFK
AEDPCLENSKDISEAYHLDTTGENPETTLKIELNVVNIKGNVCKARGESNIEVVKVTKLD
AENCESEASVSEKVCVKNDTSEVATEECKSSVEPSTETGDRQDVKEVAPEDFCSGVGLCD
NTSPINVEPQTDISEQIAGGKLGDQNESVTASSEEMNTNMENSEEIVINHVSNEIDNVTE
TDENVTTKTKSEMKIEQLNVELDSFVSDTLEMNTEEEKIDSNKTETNIELCKSEETNLDD
NQMVVGNILLEVNHTPDKAEKPTESLTSETAVSELVTENINSSPEKLRELDSLLMSANDS
PSATQTRCVWSPLASPSTSILKRGLKRLQEDEISSPINKVRRVSFADPIYRAGLADDIDR
RCPLVRSHSSNSSPIIRNVKTSPTSQTKHNTTSAKGFLSPGSRNCKFKSSKKCLITEMAK
ESISCLTESVYPPLMNCAAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEI
KALPIRSPKVSNVKKALRIYHEQQMKSHGLEEIPVFDISEKTLNGIENKSADEERLASDL
IDPAALETPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSIIKNLQSRW
RSPAHENSS
NT seq 7410 nt   +upstreamnt  +downstreamnt
atgtcggccctaggtgagaatcccctcctgccgctgttggagactttggaagactcttcc
gccttccctggagagcagaccgacgcttacctgaccctgaccagtcgtatgactggagat
gaaggaaaagaagtcgtcatagaaatggagaaaaatcttcctcggttatacaaagtttta
aagactcacatttccaatcaaaactcagagctgagtagtgctgctcttcaagctttgggc
ttttgtttatataatcccaaaattacttcaggattatcagaagcaaatattcaagaattg
ctttcagaactgaatgatattattaaaagttcagacaaaaatgtacgtaccagggctctt
tgggtaatatccaaacagacatttcccaccgaagctgttggcagaatggtatccagtata
attgattcattagaaataatacttactaaaggagagatacattctgctgttgttgatttt
gaagcattaaatgttatcataaggttaattgaacaagctccagttcagatgggagaagag
tcagtaaggtgggctaaactggtcatacctttagtggttcattcagcacagaaggtacat
ttgcggggagccacagctctggaaatgggaatgccattgttgcttcagaaacaacaagaa
atagcaaacattacagagcatcttatgactactaaattaatctcagaactccaaaagcta
tttatgaataaaaatgagacctatgttttaaaattatggcctttgttcgtcagacttctt
ggaaagaccttgcatcgaagtgggagcttcatcaattctttgctacaactggaagaactg
ggatttcgtagtggaacacccatgattaaaaaaatagcttttattgcttggaagagctta
atagataattttgctttaaattcagatatatactgttagtgcacaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaaactagaa
gtctggtggtatttgctaatgagacttggacctcatctccctgctaattttgaacaggtt
tgtgtgcctctgattcagagcacaataagtgattctagtacttcacctccaggaaattca
tcacgtgtagctgcttctccaggattaagtcctatgactcctgtacacaaaggtgcttcc
ccatatggagttcctgtaactacacggatgaatatgagtacaaatttaggtggaatggca
gcaattccttccattcagcttttgggacttgaaatgctgcttcattttttattgggtcca
gaagtcttaaattttgctaagcaacacaaacttgtattgaacttagaaccacttgaacat
ccgttaatcagcagtccttcttttttttctaaacatgcacatacacttatcactgctgtt
catgacagctttgttgcagttgaagaagatgctctgtacttactttgtttgacagatgca
gttgtcaatgctatctggaaggcgctaattagcctagtgaattcacttactgaatccgga
aataaaaaagagaaaccaggttctgaagtattgactctcctactaaaatctttagaaagc
gtagtgaaatcagaagtacttcctatatcaaaaaccctggtcctcatggaaattacaatt
aaaggacttcctcagaaagtgttaggttcaccagcatatcaggttgctaatatggatatt
cttaatggaactccagctttgttcttaattcagttaattttcagctgttatatacaggaa
tgtggaatagcagatgaaaggttttttctcaacctggaatcacttgtaggctgtgtgctt
tctggtccaacttcaccactggcttttagtgactccgttttaagtgttattaatcaaaat
gcaaagcaattggaaaataaggagcatctctgcagaatgtggagcattatagtcactccg
ttgactgaattgattaatcagaccaatgaagtaaatcaaggtgatgccttagaacataat
tttagtgccatctatagtgcattgactttaccaataaatcatattttttcagcacagaga
tttcctgtggtgaccatgaaggctttacttcgaacttggtcagaactgtatagaatattt
gctcgctgtgctgctttggtagcaactacagaagagaatttgtgttgtgaagaactttct
tctaagataatgtccactttagaagatgaagcctttttgaatttgttgttcttggacaga
atcattcatattattactgtaatagtggattgcattgacttttcaccgtataataataaa
tatcagcccatagttaaatcaccacagaggtcttcagattgggccaaaaagaagaaagag
cccctaggaaaattggcctctttgtttaaacttactgtaagagtgatttgttcgttccat
accttgagcttcaaagaaacacattctgatactctgcttggtattggcaactcaatcatc
aacatgatttccaatctccttggacatatttctttgccttctgtgattcgaaaaatattt
accgtattaacaagacccttggcattattttatgaaaattccaaccttgatgaagttcct
aaagtgtatagttctctgaacaacaagttagaaaagctactaggagaaattgttacttgc
ctgcaattcaacgctgggacctttgacagtgaacttcttgaacagctctccccactgtta
tgcataatatttctgcacaaaaataaacagattcgaaagcagtgtgctcagttctggaat
gccacatttgctaaagtgatgatgttgacttatcctgaagagttgaaaccagtactaaga
gaagccaaacagaaagttttgcttctattgcctggtttggaaaatgttgaaataatggaa
gaatccagtgcatcatactcagatgcaacagaaaattcacaattaaatatcaagataagt
ggtttggaaagaaaatcaaatggaaaaagggattcctttttggcacaaacaaagggaaga
aaagaaaatgtgaagctgtctgccaaactgaaacgagagtcttcatctctaagagtaaaa
agtgaacctcttttggaagaggaaaagtctactgattttgtgttgatacctccagaagga
aaagaatcaaaggaaagaatactaactgaacatcaaaaagaagtactcaagacaaagcgg
tgtgatattcctgccatgtataataatctggatgtttcacaagatactgtatttactgat
cactatagtcaggaagactctgtacaaactcctactttaactgaaaaaccaaaggaggat
accaaggtggtgactaaggaagaacaaatgaagagtgacactgtcattcaagatgccttg
gaaaactgtggtatggatgaacatgtcaaaaaggcttctttttcaaataatgagtgtggt
tttgttcccaaaaccaatccagaaataatgagcggtagtaacgaagccagaaaaaacagt
ttaatttcatcaaagaaaacgtcaacagaatgtgcatctagtgcagaaaattcattagtc
agcagtcaatcaatttctgatgccagtatttctgaaactcccccacaaactacaagtcgg
aggcaaagttttattaccttggagaagttcgatggttcagagaatagacctttcagtgta
ccctctttgagcagtatgtcgtcaaatactttggtgcagaatagccaggaaaacatgact
acaacagataatacatcaaaaacaaataagagagaaatgatgcattcaaaatctgattct
gaaaagaaccttcatggaattaggaaatcaagccggagattgagtaaagttgagaagtca
gcaagtaaaagatctaaacccttaataaaatctcaacaggaggaaaatcaagaattggtt
gaaggcactatatctttagaaaataattcacctgtcttttttaatcaaacagactgttca
tcagatggtcagactcatatttctgactctgttccagagcatgaagatagaagacccaaa
ctaacattagaaaatactgtgttattggaaaacggtactgtccaagacaaaaacatgggg
attaatttagaatccaaagaaaatacacctccagcgcaacccccagcagatcagatagta
aatgaagatagtcaggttcaggtaactccaaatcaaaaaactctgagacgatcatcaagg
cgacgttcagaaataacagacgctgttggtgataaccaagataaagaaaatagtcatcaa
aaaaaggaaagacataaggaagaggaaaaacttcagggcttattgcatgtaaaagatgat
gtgttacctaaacagaaactgacttacgaacaaactgggcaggaaaacttacttgagaaa
gaaagtaatttacatgagaaggcttgtggtgaaaccagtgttaatgctgacattgatcaa
agtaaaagaaaaccagaccttgagaatgttaattctcagggagatagtgccctggacatt
gtagataagtcctctgagagacctttaagaggacgaacacgttaccaaacaagaaggtta
tctcagggtttgctttctagcattgaaaactcagaatctgatagttctgaggcaaaagaa
gaaggttctaggaagaagagatctggaaaattgaaaaacaaaaacaatgacagtattgat
actgaacaagaggaaaaaatcacagaagaggaatctggaagtgtcacgaatcatacacaa
gattataaagcaatttctgagatagatgtagacaaaaagcctcaggttcttgaaaaaggt
cagagtaatactataatacttcaggattctaaaacatctgtgggcatgttgcaagtttct
gttgatgtgccaaacacatgcgaggaaagagtcaagactaccaaatgtttagagtcttcc
tttgcaagttcgcctatgccagaatcaaatttaaagactagaaatgccagtaagagatca
gttaagcaagattctgataacagtgtgggagaatgctctagaattggggcatcagaaatg
tctacactttctgaaaaaaatgtccagacaattgaatgccaccataagagaagtaggagg
gtgagaagatctaaaggttgtgactgctgtggggaaaaatctcaacctcaggaaaagtca
cccattgggttaaggaacacagaaaatactgacataaagagcagtgaaataaagaccagt
gtgcaaacacctgacacagtattagaaacagattctaaagctaatttgtgttctgaagtg
aaagttttagatgaacgtgcaagtgtgagttttagtttggttctcaaggggaatgacact
attaatgattctgtattgggacctgaaactgagttgaaaaaaaatactattcaaaagtct
tctgaaataataagtttgaaagaaaaagcttgtgatacaaattctggtgaagcatgtgat
acaaattctggtgaagcactgtgtcctgaaagtgaagaaccatctaataaaaagtttaaa
gctgaagacccatgtttagagaacagcaaggacatttcagaggcatatcatttggatacc
acaggagaaaacccagaaacaacactaaaaatagaacttaatgttgttaatattaaagga
aatgtatgtaaagcaagaggagaatccaatatagaggttgtaaaagttaccaaattagat
gcagaaaactgtgaatctgaagctagcgtctctgaaaaagtgtgtgtcaaaaatgacact
tctgaagtggcaacagaggaatgtaagagtagtgttgaacctagcacagaaacaggtgac
agacaagatgtcaaagaagtggcacctgaggacttttgttcaggtgttggcctttgtgat
aacacctcacctataaatgtggaacctcagactgacatatctgaacaaatagcaggtggt
aaactaggtgaccaaaatgagtcagttacagcctcatctgaagaaatgaatactaacatg
gaaaattctgaagaaatagtgattaatcacgtgagtaatgaaattgacaatgtcacagaa
acagatgagaatgtaactactaaaactaagtcagaaatgaaaatagaacagttgaatgta
gaacttgacagttttgtttctgacacacttgaaatgaacactgaggaagaaaagattgac
tctaataaaactgaaactaatattgaactttgtaagtctgaagaaacaaatttagatgac
aatcaaatggtagtgggaaatattttattggaagttaatcatactccagataaagcagaa
aaaccaacagagtctttgacatctgaaacagctgtctctgaactagtaacggaaaacatt
aattcatctcctgaaaaactgagggaacttgattctttgctcatgtcagcaaatgacagt
cctagtgccacacagacacgctgtgtctggtctcctttggcttctccatctaccagcatt
ttaaaaagaggactaaaacgacttcaagaagatgagatctcatcacctattaacaaggtt
cgccgtgtctcctttgcggatccaatataccgagcagggttggcagacgacattgatagg
cgatgccctcttgttaggtctcattcttcaaatagttcacctataataagaaacgttaaa
acttcacctacttcacagacaaagcataataccacttcagccaaaggatttctgtctcca
ggatcacgtaactgtaaatttaagagctcaaagaagtgtttaattacagaaatggccaaa
gagtccatatcatgcctcacagaaagtgtttacccacctttgatgaattgtgcagcacca
gttgacataattttacctcagattacctctaacatgtgggcaagaggtctaggacaactc
atcagagcgaagaatataaaaactattggggatttgagtactcttacagcatcagaaata
aaagctcttcctattcgttctccaaaagtatcgaatgtaaaaaaagctctcagaatatat
catgaacagcagatgaaatctcatggacttgaagaaattccggtttttgatatttctgag
aaaacactaaatggaatagaaaataaatcagctgacgaagaaagacttgcctcagatttg
atcgatcctgctgctttagaaactccattatcgaaaaatcttgtggcacaaattagtgct
cttgcgcttcagttggattctgaggatctccataactattcaggaagtcagctatttgaa
atgcacgagaaacttggttctatggcgaactctataataaaaaatctgcagtcacgttgg
agatcaccagcccatgaaaattctagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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