KEGG   Crocodylus porosus (Australian saltwater crocodile): 109319629
Entry
109319629         CDS       T07440                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109319629 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpoo03400]
    109319629 (MSH2)
DNA repair and recombination proteins [BR:cpoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     109319629 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 109319629
NCBI-ProteinID: XP_019404893
Ensembl: ENSCPRG00005014621
UniProt: A0A7M4F889
Position
Unknown
AA seq 939 aa
MAAAAAEPPRDAPWPEGAGAEAAFVRAVLALPAKPDTTVRFLERGDYYTAHGADAQLAAR
RLFRTRAVLRYLPGAPGNQKLESVVLSKMNFESFVRDLLLVCHYRVEVYKNRAGSKSTKE
NDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLSAAEGQRIIGVGYVDTTLRKLG
VCEFPDNDQFSNLEALLVQTGPKECVFPGGETAGDMGKVRQIIQRGGILITDRKKAEFTT
KDIVQDLNRLLKSKKEEQVNSAALPEMEKQVAISSLSAVIKYLELLSDESNFGQFELTTF
DLSQYMILDNAAVRALNLFQGSSENANSTQSLVGLLNKCRTPQGQRLVSQWIKQPLLDKN
RIEERLNLVETFVVDTELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQL
PNVVQALEKHEGVHQMLLLTVFITPLHDIYSDFSKFQEMIETTLDMSKVENHEFLVKPSF
DPNLTELREKMNEIEESMQSCLKTAARELGLEASKSIKLESSSQLGHHFRITCKEEKVLR
NNPKYKILDTQKNGVKFTNSKLSSFNEEYLKYKEEYEEAQDAIVKEIINIASGYAEPIQT
MNDVIAQLDAIVSFAHVSSGAPVPYVRPVILEKGQGRIVLKSSRHPCIEVQDDVAFIPND
VTFEKGKQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
HAFCMFATHFHELTALAGQVPTVNNLHVTALTTDDTLTMLYRVKKGVCDQSFGIHVAELV
AFPKHVIESAKEKALELEEFQNIGEPEESEGEPAVKRCYREKQEGEKIIQDFVYQVKALP
LTAMSEEDIRTKLKQLKAGVLAKNNSFVNEVIARTKATS
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcggagcctccgcgggacgcgccgtggcccgagggcgcgggggcc
gaggccgcattcgtgcgcgcggtgctggcgctgcccgcaaagcccgacaccaccgtgcgc
ttcctggagcgcggcgattactacacggcgcatggcgcggacgcgcagctggccgcccgc
cgcctcttccggacccgcgctgtcctccgctacctgcccggcgcgcccgggaatcagaaa
cttgagagtgttgtacttagtaaaatgaactttgaatcgtttgtgagagatctacttttg
gtttgtcactacagagttgaagtttataagaatagggcaggcagcaaatctaccaaagag
aatgactggtatttggcatacaagggctccccgggtaaccttgcccagtttgaggaaatt
ctgtttggtaacaatgacatgtcaactgccattggagttgtgggtgtgaagttgtccgct
gccgaggggcaaagaataattggagttgggtatgttgacacaacactaagaaagctgggt
gtctgcgagtttccggataacgaccagttctcaaacctggaagctttgctagttcagact
ggtcccaaggaatgtgtgtttcctggaggggagacagctggagatatgggaaaagtacga
cagatcattcagagaggaggaatcctgattacagatagaaaaaaggctgaattcacaaca
aaagatattgtgcaagaccttaatcgcttactgaaatcaaagaaggaagaacaggtgaat
agtgcagcgttgccagagatggaaaagcaggttgccatttcatccctgtcggctgttatc
aagtatttggagctgttgtcagatgaatccaactttggacaatttgagctgactaccttt
gacctcagccaatatatgatactggataatgcagctgtccgagcccttaacctttttcag
ggttcctctgaaaatgccaacagtacgcagtctttggttgggttgttaaataagtgcaga
acccctcaaggacaacgactggtcagtcagtggatcaagcagccacttctggacaagaac
agaatagaagaaaggttaaatttggtggagacctttgtggtagacacagagctacggcag
tgtcttcaagaagaccttctgcgtcgttttccagatcttaatcggctagcaaagaaattt
cagagacaagctgcaaccttgcaagattgttaccgaatgtatcaagctattaaccagctg
cctaatgttgttcaggcactggaaaaacatgaaggagtgcaccagatgttgttgttgaca
gtgtttataacacctcttcatgatatctactctgatttctccaagtttcaggaaatgata
gaaacaactttagacatgagtaaggtggaaaatcatgaattccttgtaaagccttctttt
gatcctaacctgacagagttaagagagaagatgaacgaaatagaggagtccatgcaatct
tgtcttaagacagcagctagagagctagggttggaggctagcaagagcatcaaactggag
tctagttcacagttagggcatcacttccgaattacctgcaaagaagaaaaggtcctccgg
aacaacccaaaatataaaatcttagacacacagaagaatggtgtgaaattcactaacagt
aaattgagctccttcaacgaagaatacttaaaatacaaagaggagtatgaagaggcccag
gatgccattgttaaagaaatcatcaacattgcttcaggttatgcagagccaatacagaca
atgaatgatgtgatagctcagttggatgctattgtcagttttgctcatgtatcaagtgga
gcccctgtgccatatgtccgcccagtcattttggagaagggacaaggacggattgtgttg
aaaagttccagacacccttgcattgaagtgcaagatgatgtagcattcattcccaatgat
gtcacctttgagaagggcaagcagacgtttcatattattactggacctaacatgggaggg
aaatctacgtacattcgccagactggagtgatagttcttatggcccaaattggatgcttt
gtaccatgtgactcagcagaagtgactattgtggattgtatcctggctcgggtaggagca
ggagacagtcaattaaaaggagtctctactttcatggcagagatgttagaaactgcttca
attcttaggactgccacagaaaattctctgataatcattgatgagttgggaagaggaacg
tcaacatatgatggatttgggctggcctgggcaatttcagaatacattgcaagcaaaatt
catgccttctgcatgtttgccacacattttcatgaactgacagcacttgctggccaagtg
ccaactgtcaataacctgcatgtcacagctcttactactgacgacacactgactatgctt
taccgtgtcaaaaaaggtgtttgtgaccagagttttgggatacatgtagcagagcttgtt
gcttttccaaaacacgtaatagagagtgcaaaagagaaagctctggagctggaggagttc
caaaacattggagagcctgaggaatctgaaggagagccagcagtgaagagatgctaccga
gaaaaacaggaaggtgagaaaataattcaggacttcgtttatcaagtgaaagcattgccg
ttgacagccatgtctgaggaagacatcagaacaaaactgaaacaactgaaagctggagtg
ctggcaaagaataatagttttgtaaatgaagttattgcccgaacaaaagccacttcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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