KEGG   Collimonas pratensis: CPter91_2476
Entry
CPter91_2476      CDS       T04306                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cpra  Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:cpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpra03009]
    CPter91_2476 (rumA)
Enzymes [BR:cpra01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CPter91_2476 (rumA)
Ribosome biogenesis [BR:cpra03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CPter91_2476 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr RrnaAD Methyltransf_31 Methyltransf_25 MTS Met_10 Methyltransf_15 PCMT TRAM Methyltransf_11 Methyltransf_23 Cons_hypoth95 DOT1 TPMT
Other DBs
NCBI-ProteinID: AMP04835
UniProt: A0A127Q4U5
Position
2504388..2505701
AA seq 437 aa
MDARGIGHLQNEDGSQGKVIFVEGALPGERVSFLSYRKKAKWEAASMTALHKESVLRVKP
HCAVFGICGGCAMQHLEPSAQVAIKQRVLEDNLWHIGKVKAESMLRPIYGPTWGYRYRAR
ISVRNVPKKGGVLVGFHERKSSFITDMKECEILPANVSAMLVPLRHLIASLSLIDHIPQI
ELAVGEGPQGKVTALVLRIMAALSADDEVKLKAFADEYQVNWWLQTAGPDSAYPFYPADG
ELYYTLPEFGVRMPFKPTDFTQVNHQINRVLVARALRLLDMQPQDRVADLFCGLGNFTLP
LATQVREVVGIEGSQALINRAGENAAVNQLADKTTLYCRNLFEATAEDFIALGKFERMLI
DPPRDGAAAVCEAIVGLAAIDKSFMPQRIVYVSCNPSTLARDAGLLTAGGYRLSQAGVVN
MFPHTAHVESIAVFDLA
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggatgcgcgcgggatcggccatttgcaaaatgaagacggcagccagggcaaggtgatc
tttgtcgaaggcgccttgccgggcgagcgcgtcagtttcctgtcgtatcgcaagaaggcc
aaatgggaagcggccagcatgaccgctttgcataaagagtcggtgctgcgggtcaagccg
cattgcgccgtgttcggcatttgcggcggctgtgccatgcagcacttggagccatcggcg
caagtggcgattaagcagcgcgtgctggaagataatttgtggcatatcggcaaggtcaag
gcagaatccatgctgcgcccgatctacgggccgacctggggctaccgctatcgtgcccgt
atttcggtgcgcaatgtgcctaaaaagggcggggtgctggtcggcttccatgagcggaaa
tcttccttcatcaccgacatgaaagaatgcgagatcctgccggcgaacgtctcggcgatg
ctggtgccgttgcgccatctgatcgcttcgctaagcctgatcgaccatattccgcagatc
gaactggcggtcggcgagggcccgcaaggcaaggtgacggcgctggtgttgcgcatcatg
gcggccttgagcgccgatgacgaagtcaagctgaaggcgtttgcggatgaataccaggtc
aactggtggttgcagactgcagggccggacagcgcctatcccttctatccggcggacggc
gagctgtactacaccttgccggaattcggcgtgcggatgccgttcaagccgaccgatttc
acgcaagtgaaccatcagatcaaccgggtgctggtggcgcgcgccttgcgcttgctggat
atgcagccgcaagaccgcgtagccgacctgttctgcggcctgggaaatttcaccttgccg
ctggctacgcaggtacgcgaagtggtcggcatcgaaggcagccaggccttgatcaaccgt
gccggcgaaaatgccgcagtcaatcaactggccgacaagaccacgctctactgccgtaac
ctgttcgaggcgactgccgaggatttcattgctttgggtaaattcgagcgcatgctgatc
gatccgccgcgcgatggcgcagccgctgtttgcgaagcgattgtcgggctggcggcgatt
gacaagagcttcatgccgcagcggatcgtctacgtctcgtgcaatccctcaaccctggcg
cgcgacgccggcttgctgaccgcgggcggctatcgcctgagccaggccggggtggtgaac
atgttcccgcatactgcgcacgtggagtcgattgcagtatttgacctggcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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