KEGG   Colwellia psychrerythraea: CPS_3744
Entry
CPS_3744          CDS       T00258                                 
Symbol
dnaX
Name
(RefSeq) DNA polymerase III, gamma/tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cps  Colwellia psychrerythraea
Pathway
cps03030  DNA replication
cps03430  Mismatch repair
cps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPS_3744 (dnaX)
   03430 Mismatch repair
    CPS_3744 (dnaX)
   03440 Homologous recombination
    CPS_3744 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cps03032]
    CPS_3744 (dnaX)
   03400 DNA repair and recombination proteins [BR:cps03400]
    CPS_3744 (dnaX)
Enzymes [BR:cps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPS_3744 (dnaX)
DNA replication proteins [BR:cps03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPS_3744 (dnaX)
DNA repair and recombination proteins [BR:cps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPS_3744 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_tau_5 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_14 AAA_16 AAA_5 PIF1 AAA_18 AAA_7 nSTAND3 AAA_2 AAA_19 TsaE SKI AAA_24 ResIII dUTPase_2
Other DBs
NCBI-ProteinID: AAZ28151
UniProt: Q47XQ9
Position
complement(3906377..3908524)
AA seq 715 aa
MSYQVLARKWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAK
SLNCELGITDKPCGKCDACIDIDQGRFVDLLEIDAASKTKVDDTREILDNVQYAPSRGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTV
KQIEDKLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQM
LGGIDQNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQ
PFDLPADLLALLKKFSQAMSAEDVQLYYQISLNGRKDLPYAFDEQAAFDMTLLRLFAFKP
MQKSQLTNESTIDNIEQNTAISFDDDNLSKTTETLSNNADIAKAAVTEAVVESFAEVDIS
DSAAATDNTQQTELNEQMLAIEQQADELKQSENNSLNQTPAQHVVSQEVKAPQQVPVVES
YKEKQNTAPIVPNEQVGQLSIHSPVGSVLATRNMLRSRKKELEKQTKKSSDATLRQPNRA
DNSKNKTQDSVNATVKPQVVSTESLVIAPEPDLPFHQDSIDPAKVTKANQVDKWAHMIDS
MQLTARIRQLAIHATISEKSTDDNLILKLDQATRHLSTEIAHQHLQSAICEFLARQITVT
LDIVEETVADPYQIQGQINDKRLEYAKTLLKEDAVVIALQETFQASLNEESISPR
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgagttatcaagtcctagcaagaaaatggcgcccaaagaactttcagcaattgatgggg
caagaacatgtcgtcaatgtacttgcaaatgctttatctcaaaagcgtttacatcatgct
tacctttttacgggtacgcgaggtgttggtaaaacgactattgcacggatttttgctaag
agtctaaattgcgaacttggaataacagataaaccctgtggaaaatgtgatgcctgtatt
gatatcgaccaagggcgtttcgttgatcttttggaaatagatgcggcttctaaaacgaaa
gttgatgatacccgtgaaattctagataacgtccaatatgcacctagtaggggccgattt
aaggtttacctgattgatgaggtacatatgttatctcgtcatagctttaatgcgttacta
aaaacgttagaagagccacctgagcatgttaaatttattttagcgactacagatcctcaa
aaattacctattacagtgttgtcacggtgtctacaatttcatttaaaagcgttaactgtc
aaacaaattgaagataagcttgctgaaatactttctcatgaacaagtgagtcacgagcaa
ggttgtctgacgttattagctaaagctgctcgtggcagtatgcgagattcattaagttta
accgaccaggctattgctcaagggcaaggtcatattaacttaactaatattcaacagatg
ctcggtggtatagatcaaaactgggtttaccagttggtgattactttactaaaacaagac
agccaagcgttgatgactttatctcaagagatagcctcttatgcgccaagttatagccgt
ttatttgctgaattaattcaactatttcatcaaatagctctaatgcaaatagttgagcaa
ccttttgatttaccggcagacttattggctttattgaaaaagtttagtcaagccatgtca
gctgaagacgttcaactttattaccaaataagccttaatggccgaaaagatttaccgtac
gcttttgacgaacaagctgcttttgatatgacgttgttgcgactatttgcttttaaacca
atgcaaaagtcacagcttaccaatgagtctactatagataatattgagcaaaacacagcg
attagcttcgatgatgataacttgtcaaaaaccactgaaactctttcaaataatgctgac
atagctaaagcagcggttacagaggccgttgttgagagctttgctgaagtggatattagt
gactccgctgctgctacggacaatactcaacaaactgagttaaatgagcaaatgcttgcc
attgagcaacaagctgatgaactcaaacagagtgagaataactcattaaatcaaacccca
gcgcagcatgtggtttctcaagaagttaaagctccacaacaagtgcctgtggtagaaagt
tataaagaaaaacaaaatacagcgcccattgtgcccaatgaacaagtagggcaacttagt
atccatagtccggtaggctctgtgctcgcgactcggaatatgctacgtagtcgaaagaaa
gagttggagaagcaaacaaaaaagtccagtgacgcaactctgcgtcaacctaatagggca
gacaatagtaaaaataaaactcaggacagtgttaacgctacagttaagcctcaagttgta
tcaactgaaagcttggtcattgcgccagaacctgacttaccgtttcatcaagatagtata
gatcccgcaaaagtaacaaaagcgaatcaagttgataaatgggcgcatatgatcgattca
atgcagcttaccgcgcgtattcgtcaattagcaatacatgcaacaatcagtgaaaaatct
actgatgataatttgattcttaagctagatcaggcaactagacatttaagtactgaaatc
gctcatcaacatttacagagcgctatttgtgaattcttagcaagacaaatcacggttaca
cttgatattgtggaagaaacggttgccgacccatatcaaattcaaggtcaaattaatgat
aagcgtctagagtacgctaagactttattaaaagaagatgccgtggtgattgccttgcaa
gaaacttttcaagcaagtttgaatgaagagagtatttcacctcgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (59)   

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