KEGG   Corynebacterium pseudotuberculosis 48252: CPTA_01193
Entry
CPTA_01193        CDS       T03482                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpse  Corynebacterium pseudotuberculosis 48252
Pathway
cpse03420  Nucleotide excision repair
cpse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CPTA_01193
   03430 Mismatch repair
    CPTA_01193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpse03400]
    CPTA_01193
Enzymes [BR:cpse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CPTA_01193
DNA repair and recombination proteins [BR:cpse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPTA_01193
   MMR (mismatch excision repair)
    Other MMR factors
     CPTA_01193
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor Viral_helicase1 DEAD ResIII
Other DBs
NCBI-ProteinID: AIG07022
Position
1235171..1237711
AA seq 846 aa
MNNSDDFPTQQGFDFGDWATAKKTPAEPSPFSSHTYRQEEHRTWTTAKDQQPASTSAPAD
DLVQGLNPQQQQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLMRIRGVQPGQILAITFTN
KAAAEMRERVAHLVGPIASRMWVSTFHSTCVRILREQAQLVAGLNSNFTIYDSDDSKRLL
AMISKDMNLDIKKFTPRLLGAGISNLKNELISPATAVAEAESTKNPYETTVAAVYVEYQR
RLRQANAVDFDDLIGETVRIFKEHPQVTEYYRRRFRHVLIDEYQDTNHAQYVLIHELVGT
GETASELCVVGDSDQSIYAFRGATIRNIEEFERDYPNATTVLLEQNYRSTQTILNAANSV
ISQNENRRKKKLWTALGSGDPITGYVADNEHDEARFIAQEIDALADKGIDYSDMAIMYRT
NNSSRAVEDVFMRSGIPYKVVGGTRFYERKEIRDVIAYLRLLDNPEDTVSLRRIINTPRR
GIGDKAVAFLTLHSENQGVSLQQALIDASEGQVSLLGARGRNAISGFVNMMSGLRDSAAE
SVNEITGMPDIGNVIAQILDITGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQ
VAYAKMDGSELDDLAAVGEPEPGSLQAFLERVSLVADADQIPDNEQGLVTLMTLHTAKGL
EFPVVFLMGWEDGQFPHLRALGDPKELAEERRLAYVGITRARKALYITRAMLRSSWGNPV
TNPASRFLTEIPQELLDWRREEPESSFDAWGQPSWGRNTGFSSARGDSWGSPRYGASPKP
KKTMPSYAKNSDLSLVVGDRVNHDKYGLGTVTKVDKGSPADSVTIDFGSSGTVRLMLIGP
VPMEKL
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgaataactctgacgattttccaacccaacaaggttttgactttggcgattgggctacc
gccaaaaagacgccagctgaaccatctccgtttagctctcatacctacagacaagaagag
cacaggacctggactacagcaaaggatcagcagcctgctagcacgtctgcaccggctgat
gacttggtccaggggcttaatccgcaacaacagcaagcagtagaacacagtggctccccg
ttacttattgtggccggcgcaggttcaggcaagacagcagtacttacgcgccgtatcgcc
tacctcatgcgcatacgaggcgtgcagccaggacagattttagctatcacatttaccaat
aaggctgcggctgaaatgcgagagcgcgtggctcatctcgtggggccgatcgccagcaga
atgtgggtgtctaccttccactccacgtgcgtacgcatcttgcgagaacaggctcagctg
gttgctggattaaacagcaatttcaccatctatgactcagatgattcaaagcgattactc
gcgatgatctctaaagatatgaacttagacatcaaaaagttcacgccgcgcttattgggg
gcgggaatctctaacctcaaaaatgagttgatttctcccgccacggcagtcgcagaagcc
gaaagtactaagaatccgtatgagacgacggtagctgccgtatacgttgagtatcagcga
cgcttaagacaagctaacgcggtcgattttgatgacctcatcggagagacagtacgtata
ttcaaagagcacccccaagtaaccgaatattacaggcgcagattccgccatgtgcttatc
gacgaataccaggacaccaaccacgcacaatatgtccttattcatgaactggtagggact
ggggaaaccgctagtgaattatgcgttgtcggagattcagatcagtccatttatgccttc
cggggcgcaactatacgcaacattgaggaatttgagagggactatcccaacgccacgacc
gttctcttggagcagaactaccggtcgacacaaacgatccttaacgcggctaactcggtg
atctcccaaaacgagaaccgacgaaaaaagaaattgtggacggcgctaggtagcggggat
ccaatcacagggtatgtcgcagataatgagcatgatgaggcccgttttattgcccaagaa
atagatgcgctcgcagataaaggcattgattacagcgatatggccattatgtatcgcaca
aataactcatcgcgtgccgtggaagacgtgttcatgcgttctggtattccctataaggtc
gtgggaggaacccgattctatgagcgcaaagagatccgggacgttattgcttatctacgt
ttactggataaccccgaagatacggtttctctccgtaggattattaacacgccgcgccgg
gggatcggcgataaagccgtagcgtttctcaccctacattcagagaaccaaggagtgagt
ctccaacaagcgcttatcgacgcctccgaggggcaggtgagtcttctaggggcgcgcgga
cgcaacgcgatttcgggctttgtgaacatgatgtctgggctgagggatagcgcagccgaa
tccgtcaacgagatcaccggtatgccagatattggcaatgttattgctcaaatacttgat
atcacgggatataaggcagagctggaaaagagtaacgatccacaagatggtgcacgatta
gacaaccttaacgagcttgtctcggttgcccgagagttttcctcagaggcggccaaccag
gtggcgtatgccaagatggacggcagcgaactcgatgatttagctgctgtgggagaacca
gaaccgggtagtttgcaggcttttctggagagggtctcccttgtcgctgatgccgaccaa
atccctgataatgagcagggcttggtcactcttatgactttgcatacagccaaaggacta
gagttcccggttgtcttcctaatggggtgggaagacggacaatttcctcacctgcgcgcg
ctgggagaccccaaagaacttgcggaggaacgacggcttgcgtatgtgggaataacgcgc
gcgcgcaaggccctctatataacccgagctatgttgaggtcctcctggggaaatcccgta
actaacccggcatcaaggtttcttacagagattcctcaagagcttcttgattggcggcga
gaggaaccagaaagttctttcgatgcgtgggggcagccttcctggggcagaaacacaggc
tttagctccgcgcgcggcgattcgtggggatcaccgcgttatggtgccagcccgaaaccc
aagaaaacgatgccaagctatgcaaagaacagcgatctttctttggtagtcggagatcgg
gttaatcatgataaatatggccttggtaccgtgaccaaggtggacaaaggcagtccggcg
gattccgtaactattgattttggttcctctggaacagtacggcttatgctgatcggccca
gttccaatggaaaagctttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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