KEGG   Chlamydia psittaci M56: B602_0085
Entry
B602_0085         CDS       T02310                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cpsm  Chlamydia psittaci M56
Pathway
cpsm03030  DNA replication
cpsm03430  Mismatch repair
cpsm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpsm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B602_0085 (dnaE)
   03430 Mismatch repair
    B602_0085 (dnaE)
   03440 Homologous recombination
    B602_0085 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpsm03032]
    B602_0085 (dnaE)
   03400 DNA repair and recombination proteins [BR:cpsm03400]
    B602_0085 (dnaE)
Enzymes [BR:cpsm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B602_0085 (dnaE)
DNA replication proteins [BR:cpsm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B602_0085 (dnaE)
DNA repair and recombination proteins [BR:cpsm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B602_0085 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 HHH_3 DUF655
Other DBs
NCBI-ProteinID: AFS25021
Position
complement(88343..92071)
AA seq 1242 aa
MTWIPLHCHSQYSILDATSSIKSFVAKAKEYQIPSLALTDHGNLYGTIEFYKECQQNDIK
PIIGCEIYVAPSSRFDKKKEKKSRVANHLILLCKNELGYRNLCLLSSLAFTEGFYYFPRI
DRDLLSQHAEGLICLSACLSGSVAQAALESEEALEKDLRWYQNLFGEDFYSEIQLHKMSE
EKIASLGEEWLKHEYYQFIDSQTKVNQAVLDASKRLGIRSVATNDIHYIHADDWLAHEIL
LNVQLGETIRIAKQNTYIPNPKRKTFRSREYYFKSPEEMAMLFADHPETITNTLEVADKC
NLELNLSSKHYPIYVPDFLKDKPNYTEEERYAASSAFLRELCEKGLSTKYTPEKLGHISK
KFPDRDPLELVKERLEMEMSIIIPKGMCDYLLIVWDIIYWAKDNGIPVGPGRGSGAGSVM
LFLLGITEIEPIRFDLFFERFINPERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQI
ITFGTMKAKMAVKDVGRTLDVALSKVNHIAKHIPELNTTLAKALETDPHLNELYTNDAEA
AQVIDMAMRLEGSIRNTGVHAAGVIICGDRLTNHIPICISKDSTMITTQFSMKPVESVGM
LKVDFLGLKTLTSIHIAIRAIEKKTGKLLEMASLPLDDKTTFALLHQGKTMGIFQMESKG
MQELAKNLRPDSFEEIIAIGALYRPGPMDMIPSFINRKHGKEIIEYDHPLMESILKETYG
IMVYQEQVMQIAGSLASYSLGEGDVLRRAMGKKDIDQMLKERTRFCERACKNGIDADLAT
TIFDKMEKFASYGFNKSHAAAYGLITYTTAYLKANYPREWLAALLTSDSDDIEKVGKLIH
EAHSMDICILPPDINESGTDFVATDKGIRFAMGAIRGIGKGLVESIIEEREKHGPYQSIQ
DFIQRSDLKKVTKKHTENLIDAGCFDVFEPDRDVAQATLESLYDSISKEKKEAATGVMTF
FSLNTMNQKHPITLTPAADVVRRSKKEILKKEKELLGIYLTEHPMDAVKDILPRLSVVSP
GEFDNLPHGAVIRTIFIIDKVTTRISSKGQRKFALLRVSDGVDSYELPIWPEMYAEQQEL
LEEDRLIYAILSIDKRSESLRLSCRWMRDLSLINEDLIQECDDMFDKIRSQMQKMSYLNL
ETNKDANQRKTSTMSKSTDHKSQVPTVKLSLDLEQLRHSHLCTLKQIIRKYPGSRALSLV
FTKNNERVASISPDSDYFVSEDTSGLQKDLENSQLPVRFIAV
NT seq 3729 nt   +upstreamnt  +downstreamnt
gtgacttggatacctcttcattgtcattctcaatactctattctagatgctacaagctct
attaagagctttgtagcaaaagcaaaagagtatcaaattccttccttagcgttaacagat
catgggaatctctacggaacgattgagttttacaaagagtgccaacaaaacgatattaag
cctattattggctgtgaaatctacgtcgctccttcatcacgttttgataaaaagaaagag
aaaaaaagccgcgttgccaatcacctcattctgttatgtaaaaacgaactaggctatcgt
aatctttgtctattatcttccttagcttttactgaagggttttattattttcctagaata
gacagggaccttcttagccaacatgctgaggggttaatttgtttatccgcgtgtctttct
ggttctgtagcacaagcggcattagaatcagaagaggctctagaaaaagatctccgctgg
tatcaaaatttattcggggaagatttttacagtgaaatccaactgcataaaatgtctgag
gagaaaatagcttctctgggtgaagaatggttgaaacatgagtattatcagtttattgat
tcccaaacaaaggtaaatcaagctgtattagatgcaagtaaacgtttaggcattcgatcg
gtagctacaaacgatattcactatattcatgctgatgattggttagctcatgagattctc
ctcaatgtccaactaggagaaaccataaggatagcaaagcagaatacctatatccccaac
cccaagagaaaaactttccgtagtagggaatattattttaaatcccctgaagaaatggca
atgttatttgccgatcatcctgaaacgattactaatactttagaagttgctgataagtgc
aacctagaattaaatctttcaagcaaacactaccctatttatgttcctgattttttaaaa
gataagccaaactatactgaagaagagcgttacgcagcttcttcagcttttcttcgagaa
ctttgtgaaaaaggcttgtccacaaaatacactccagaaaagcttggtcatatctcaaaa
aaattccctgatcgcgatcccttagaattagtcaaagaacgcttagaaatggaaatgtct
atcatcattcctaaagggatgtgtgactacctgctgatcgtttgggacatcatctattgg
gcaaaagataatggtattcctgtaggtcctggtcgtggttctggagcaggctctgttatg
ttattcctattaggaatcacagaaatagaacctattcgttttgacttattctttgagaga
ttcattaacccagaaaggttatcctaccctgatatcgatatcgatatctgtatggcggga
cgtgaacgcgtcattaactatgcaatagaacgtcatgggaaagataacgttgcccagatc
attacttttggaactatgaaagccaaaatggctgtaaaagatgtgggtagaactttagat
gttgccctttctaaggttaaccacattgccaagcatattccagagctgaatactacgtta
gcaaaagccttagaaacagaccctcacctaaacgaattgtataccaacgatgctgaagca
gctcaagttatcgacatggcaatgcgtctagaaggatctatccgcaatacaggagtgcat
gctgctggagtgatcatctgtggagatcgcctaacgaatcacatacccatttgtatttct
aaagactctaccatgatcaccacacaattttccatgaagccagtggaaagtgtaggcatg
cttaaagtagacttcttaggattaaaaaccctaactagtatccacatagccattcgtgca
atcgaaaagaaaacgggaaagttattagagatggcatctctacccctagatgacaaaacg
acatttgctcttttgcatcaagggaagactatgggtatattccaaatggaatccaaagga
atgcaggaattagcaaaaaatctccgtcctgattcttttgaagaaatcatagcgataggt
gctttgtatcgtccaggtcctatggacatgattccctcattcatcaaccgaaagcacggg
aaagagatcatagaatacgaccaccccttgatggagagcattctcaaagaaacctatggg
attatggtttatcaagagcaagttatgcaaattgccggctctttagcaagctactccttg
ggagagggtgatgtcttacgtcgtgctatgggtaaaaaagacatcgatcaaatgctcaaa
gagcgaacaagattttgtgaacgagcatgcaaaaatggtattgatgctgatctagcaacg
actatttttgataaaatggaaaagtttgcttcttatggatttaataaatctcatgcggct
gcttatgggttaatcacttatacaactgcatatctcaaagcgaactatcctagagaatgg
ttggcagctcttcttaccagtgattctgacgatattgaaaaggtagggaaactgatccat
gaagcgcatagcatggatatctgtatccttcctcctgatatcaatgaatcaggaactgat
tttgttgctacagataagggcattcgttttgctatgggggccatccgaggtatagggaag
ggccttgtagaaagtattatagaagagagagagaaacacggtccttatcaaagcattcaa
gattttattcaacgctctgatttaaaaaaagttactaaaaaacatacagaaaacttaatc
gatgcgggatgttttgatgtttttgaaccagatagagacgtagctcaagcaactttagaa
tccctatacgatagtatatctaaagaaaagaaagaggcagctactggtgtcatgaccttc
ttttctttaaatactatgaatcaaaaacatcctatcaccttaactcctgcggctgatgtt
gtccgtagatcaaaaaaagaaatacttaagaaggaaaaagaacttttagggatctacctt
actgagcaccccatggatgctgttaaagatattttacctcggctttcggtggtaagtcct
ggagaatttgacaatctccctcatggagcagtaattcggacaatatttattattgataag
gtaacgacacggatttcctcaaaaggccaaagaaaatttgctttattacgtgttagcgat
ggcgtagattcttatgaactgccgatatggccagaaatgtatgctgagcagcaagagctc
ctagaagaagatcgtttaatttacgctattttatctattgataaacgtagcgaatctcta
cgcttatcttgccgatggatgagagacctgtctcttattaatgaagatctcattcaagaa
tgcgacgatatgtttgataaaatcagaagtcaaatgcagaaaatgtcgtatttaaattta
gaaactaataaagacgcgaatcagaggaaaacatcaaccatgtcaaagtctactgatcac
aagtctcaggtgcccacagttaagctatctttagatcttgagcaactacgccatagccac
ttatgtacgttaaaacaaatcattcgcaaatatcctggatctcgcgcactctctctagtt
tttaccaaaaacaatgaacgtgtagcctctatttctccggactctgattattttgtctct
gaagatactagcggtcttcaaaaagatttggaaaattcccaacttcctgttcgattcatt
gctgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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