KEGG   Coniophora puteana: CONPUDRAFT_110302
Entry
CONPUDRAFT_110302 CDS       T03134                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cput  Coniophora puteana
Pathway
cput03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CONPUDRAFT_110302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cput03021]
    CONPUDRAFT_110302
Enzymes [BR:cput01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CONPUDRAFT_110302
Transcription machinery [BR:cput03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CONPUDRAFT_110302
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 19198822
NCBI-ProteinID: XP_007773062
JGI: Conpu1_110302
UniProt: A0A5M3MDM5
Position
Unknown
AA seq 1143 aa
MGTADDEEHDWEQLNQTNWRGLGVTDPIKNVEDKWLLLPAFLKVKGLVKQHIDSFNYFVD
VDIKNIVKANNKVTSDVDPRFWLKYTDIHVGFPDRTDLDAIDKSITPHECRLRDITYSAP
ILVTIQYTRGKNVVKRPNVNIGRLPIMLRSSKCILTGKSEAQLARMTECPLDPGGYFVVK
GTEKVILVQEQLSKNRIIVETDPVKGVVQSSCTSSTHGGLKSKTYVATKKGKIYLRHNSI
HEDVPIVIALKALGIQSDKEILLLTAGNTEAYKLAFSANLEDAARLGVFTRHQALEWIGT
RVKVNRKVVGPRRPAWEEALEALATIVLAHVPVNGLDFRPKAIFVATMTRRVLMCMDDEK
MVDDRDYVGNKRLELAGQLLALLFEDLFKTFNTNLKSAIDKVLKKPSRTNEFDAFNTMQF
QGDHITSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVS
GPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIIRIAYMLGVEDISLA
SGTEIYGPHTFVVNVNGTIIGLTRYPTRFVTNFRRLRRAGRFSEFVGVYVNHHHRTVHIA
SDGGRICRPMIIVEDGRPRVNSGHISLLKQGHLSFDDFLRQGLVEYLDVNEENDSYIALY
ESDIVATTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQFNRID
TLLYLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALILNKASLDRGY
GRCQVLRKNATLIRKYPNGTFDRLADAPLDDNGQIQKKYDIIQLDGLAGVGERVDPGDVY
VNKQTPTNANDNTFTGQAAAVPYKNAPLSYKSPVAGYIDKLMVSDTENDQTLIKVLIRQT
RRPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGINPDTIMNPHGFPSRMTVGKMIELLS
GKAGVLSGKLQYGTAFGGSKVEDMSRILIEHGFSYAGKDMLTSGITGELLEAYVYFGPIY
YQKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERL
MISSDKFEVNACQECGLMGYNGWCPYCKSSKQMAKLTIPYAAKLLFQELMAMNVVPRLIL
DDA
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgggtaccgcagatgacgaagaacatgattgggagcagctgaaccagacaaattggcgc
ggcttaggggttacagatccaatcaaaaatgtcgaggacaaatggcttctcctacccgcc
tttctcaaggttaagggtctagtaaaacagcacatcgattcgttcaactatttcgtcgat
gtcgatatcaagaacatcgtcaaggcaaataacaaggtgacttcggacgtagacccgcgc
ttctggctcaaatacaccgacattcatgtcggtttcccagaccgtaccgacttagacgca
atcgacaagagtatcactccgcatgagtgccgcctccgtgatatcacctacagcgctccg
atccttgtaaccatccagtacactcgcggcaagaatgtggtcaagaggcccaacgtcaat
attggtcgtttgccgatcatgctgcgcagcagcaagtgtatactgaccggaaagagcgag
gcccaactggctcgcatgacagagtgccctctggaccctggaggatactttgtggtcaaa
ggcaccgagaaagttattctcgtccaggagcagctgagcaagaaccgcatcattgtagag
acggatccggtcaaaggagtcgtacagtcatcgtgtacttcgtccactcacggtggtttg
aagtcgaagacatatgtagcaacaaagaaaggcaaaatctatcttcgtcacaactccatt
catgaggacgttcctatagttattgccctcaaagctcttggtatccagtctgacaaggag
atcctacttctcactgctggcaatactgaggcttataaactcgcgttttctgcaaactta
gaggatgccgccaggctgggcgttttcaccagacatcaggctttggaatggatcgggacg
cgtgtcaaggtaaaccgaaaagttgtgggtccccgacgacctgcatgggaagaggcacta
gaagctctggcgaccatcgttctagctcacgtcccagtcaacggacttgattttagaccc
aaggccatattcgtggccaccatgactcggcgagttttgatgtgtatggacgacgaaaaa
atggttgatgaccgagactatgttggaaataagcgccttgaacttgcgggccaactgctc
gccttattgtttgaagacctgttcaaaactttcaacacgaatttgaagtcggccatcgat
aaggtcttgaagaagccttctcggacgaacgagttcgatgctttcaacaccatgcaattt
caaggagaccacattacttccggcttcgttcgtgcgatctctacggggaactggtcgctg
aaacgtttcaagatggagcgcgcaggcgtcacgcacgtgctcagcaggctcagcttcatt
tcggctttgggtatgatgacccggatatcctcacagttcgaaaagacgcgcaaagtcagc
ggaccccgtgccttacagcccagtcagtggggcatgctgtgcccaagtgatactcctgaa
ggcgaggcttgcggactagtcaagaatttggccctgatgacacacattaccacggatgtc
gaagaggaaccgataattcggatagcatacatgttaggagttgaagacatcagtttagct
tccgggacggagatatacgggccacatacgttcgtggttaacgtaaacggtacgatcatt
ggcttaacaaggtaccccacacgcttcgtgacgaacttccggagacttcgcagagcgggc
cgctttagcgaattcgtgggcgtatatgtgaatcatcaccaccggaccgttcacatcgcc
agcgacggtggccggatatgccgcccgatgattatcgtggaggatggcaggccaagagtt
aactctggacatatctcgctactcaaacaaggacatctctcattcgatgacttcctccga
caaggcttggtcgagtatcttgatgtgaacgaggagaacgactcctatatcgcgttgtat
gagtccgacatcgtcgcaacgaccacgcacctcgagatcgaaccctttacaatccttggt
gccgttgccggcctcattccatacccgcaccacaatcaatctccacgaaatacgtaccaa
tgtgccatgggtaaacaagctataggtgccattgggtacaaccaattcaaccgcatcgac
acgcttctgtatctgtctgtttatcctcaacaaccgatggtcaagacgaaaacaattgaa
ctcattgggtacgaccgtctacctgccggacaaaatgccaccgtggccgtcatgagctac
tccggctacgatattgaagatgcccttatccttaataaggccagtctcgatcgtggctat
ggtagatgtcaggtcctacgcaagaatgcaactctgatacgtaaatatcccaacggcacc
ttcgatcggttggccgatgcacctctagatgacaatggacaaattcagaaaaaatatgat
atcatacaactagatggactcgctggagtcggggagcgtgtcgaccccggagatgtctat
gtgaacaaacaaacgccaacgaacgctaatgacaacactttcactggtcaggccgccgca
gtaccctacaagaacgcgcctctttcgtacaagtcacctgttgctggttatattgacaag
ctcatggtcagcgacacggagaacgaccaaacactcatcaaagttctgatccgtcaaaca
cgaaggccggagcttggtgacaaattctcgtctcgccacggacaaaaaggcgtatgtggt
ttgatcgtgaatcaggaggacatgcccttcaatgatcagggcatcaacccagatacgatt
atgaatccccatggtttcccctctcgtatgactgtcggcaaaatgatagagctgttgagt
ggcaaggccggtgtcctcagtgggaagctccaatacgggacagcatttggtggctccaag
gtcgaagacatgtcacgaatcttgatcgagcacggcttcagttatgctgggaaggacatg
ctcactagtggtataacgggcgagctgctagaagcatacgtctattttggaccgatttat
taccagaaattgaaacatatggtcatggacaagatgcatgctcgagccagaggcccgcga
gcaacgcttaccaggcagcctacggagggccgctcccgcgaaggaggcttgcgtctcggc
gaaatggagcgcgactgcctcatcggttatggtgctactcaactgttgctcgaacgtcta
atgatctcctcggataaattcgaggttaatgcctgccaggaatgtggcttgatgggatat
aacggctggtgtccatactgcaaaagctcgaagcagatggccaaactcactataccatac
gcggctaaattgctgttccaagagctgatggctatgaacgtagtccccaggctgatcctg
gatgatgcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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