KEGG   Coniophora puteana: CONPUDRAFT_163398
Entry
CONPUDRAFT_163398 CDS       T03134                                 
Name
(RefSeq) RPB5 subunit of DNA-directed RNA polymerase
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cput  Coniophora puteana
Pathway
cput03020  RNA polymerase
cput03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CONPUDRAFT_163398
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONPUDRAFT_163398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cput03021]
    CONPUDRAFT_163398
   03400 DNA repair and recombination proteins [BR:cput03400]
    CONPUDRAFT_163398
Transcription machinery [BR:cput03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CONPUDRAFT_163398
  RNA polymerase III system
   RNA polymerase III
     CONPUDRAFT_163398
  RNA polymerase I system
   RNA polymerase I
     CONPUDRAFT_163398
DNA repair and recombination proteins [BR:cput03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CONPUDRAFT_163398
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat Toprim_2
Other DBs
NCBI-GeneID: 19204909
NCBI-ProteinID: XP_007765977
JGI: Conpu1_163398
UniProt: A0A5M3MYW1
Position
Unknown
AA seq 207 aa
MAEDETAKLWKVNRTVHELVKDRGYQVSDDEIHMDFATFKSHYANNGGSVDRNQLNFFTN
SQENPTEQIFIYFSDERSVGIKTMRKLIAILEEKSIQRAIIIFPGAMTGAARKVIVAMAS
QYRIEEFSESDLLVNITHHILVPKHEVLTPEQKKALLEKYRLKDTQLPRIQLADPVARYY
GLRRGQVVKITRPSETSGRYASYRICF
NT seq 624 nt   +upstreamnt  +downstreamnt
atggccgaggacgagaccgcaaagctctggaaggtcaatcgcacagtacacgaacttgta
aaggacaggggataccaagtttcagatgacgagatacacatggacttcgctacattcaag
tcacactacgcaaacaacggcggcagcgtagatcgaaatcagctcaatttcttcacgaat
tcgcaggaaaaccctaccgaacagatctttatttacttctcagatgagcgtagtgtcggt
atcaagacaatgcgaaagctcattgccattctcgaggaaaaatccatccagcgggcaatc
atcatcttcccgggtgccatgacgggtgctgctcgcaaggttattgtggcgatggcatcc
caatatcgcatagaggagttctctgaatcagaccttctcgtcaatatcactcaccatatc
ctggtacctaagcacgaagtgctcaccccagaacaaaaaaaggcattgcttgaaaaatac
cgcctcaaggacacgcagcttcctcgcatacaactggcggatcctgtcgcccgctattac
ggcctccgacgaggccaggtagtcaaaattactcgtcctagcgagacaagtgggcgctac
gccagctaccgtatctgcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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